Vibrio cholerae O1 IEC224: O3Y_04035
Help
Entry
O3Y_04035 CDS
T01766
Name
(GenBank) membrane-bound lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
vci
Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vci01011
]
O3Y_04035
Enzymes [BR:
vci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
O3Y_04035
Peptidoglycan biosynthesis and degradation proteins [BR:
vci01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
O3Y_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AFC57688
LinkDB
All DBs
Position
I:complement(926968..928560)
Genome browser
AA seq
530 aa
AA seq
DB search
MTPFAYKLPIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPD
GPTGLDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRA
GPAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQ
KYPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPIS
WFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPR
WTPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPE
QSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWAD
VKDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDL
TVIALDEEFFNEEANREILDEEAEALESESLENSESSAEPSAKPSTESKN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgactccttttgcctataaactccccattcgcgcactctggctaggcttattaagcctg
ctcttagtcggttgccaaatcgattccgagcccaaaagcgagctagaaaaaattcgtgaa
cgtggtgttttacgcgttggtacgctcaacaatcccctctcctactacatcggccctgat
ggcccaacgggattggattacgagttagcccgcgaatttgccaaagagcttggcgtaaag
ctggaaatgaagccagcataccgcctatctagcctgtttcctgccttaaaaaacggtgaa
gtggacatcattgccgcaggcttaagccaatccgaagagcgactcaaagattttcgcgca
ggtcctgcttattattacgtttcgcagcaagtggtctataaaaaaggtgactggcgacca
cgcagcttcaaacagttggtcgaacgccagcaaaccttattaaaggacaatcctgagctc
gcctttttcagcgtggtggatgactcccattttgagcacaccttgctagccaaacagcag
aaataccccgattttcaatttcatgtcgacagcaattccgatgtgaatgacttactgaaa
aaagtctcacaaggagagttactgtttacgatggccgactctgttgaggtgtcgctttct
caacgcatctatcctgaactggcggcggcatttgaattaaccgaagatcagccgatctca
tggtttatccgccgttccgacgatgaaagtctgtatgccttaatgattgaattctttggc
aatctcaagcaatcgggctatttggcgtctttggaagaaaaatacatcggccatattggt
gcctttgattatgtcgatacccgcgcctttattcgcgcgctggatacacgattacctcga
tggacgcctctctttcaaaagtactcggcagagtttgattggcgtttagtcgccgcactt
gcgtatcaggagtcgcactggaatccgtatgccaaatcgcccacgggtgtccgtggtttg
atgatgttgacactaccaaccgcgcgcagtgtaggggtaagcgatcgcctcgatccagaa
cagtcgattcgtggtggggtggaatacttgcgacgtatgatggagcgtgtccctgactcg
atttccgaacatgaaaaaatttggtttgccttagcctcttacaacattggctacgggcat
atgatggatgcgcgacgcttaaccaaaagccaaggcgcagatcctgactcatgggcggat
gtcaaagatcgcctaccacagctacagcagaaaaaatatttcacccagacccgctatggc
tatgcgcgtggcgacgaagcacgtaattatgtggaaaatattcgccgttactatcaaagc
atcatcggccatcttgagcagcgtcaattggcgacaggcgatgaaagtattgaagatctc
accgtgattgcgcttgatgaagaatttttcaatgaagaagcaaaccgtgaaatcttggat
gaagaagcggaagcactcgaatcagagtcactcgaaaacagtgaatcgagcgccgagcca
tctgccaaaccatccactgagagcaaaaattag
DBGET
integrated database retrieval system
