Vibrio cholerae O1 IEC224: O3Y_04375
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Entry
O3Y_04375 CDS
T01766
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci00260
Glycine, serine and threonine metabolism
vci00460
Cyanoamino acid metabolism
vci00630
Glyoxylate and dicarboxylate metabolism
vci00670
One carbon pool by folate
vci00680
Methane metabolism
vci01100
Metabolic pathways
vci01110
Biosynthesis of secondary metabolites
vci01120
Microbial metabolism in diverse environments
vci01200
Carbon metabolism
vci01230
Biosynthesis of amino acids
vci01240
Biosynthesis of cofactors
vci04981
Folate transport and metabolism
Module
vci_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
O3Y_04375 (glyA)
09102 Energy metabolism
00680 Methane metabolism
O3Y_04375 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
O3Y_04375 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
O3Y_04375 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
O3Y_04375 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
O3Y_04375 (glyA)
Enzymes [BR:
vci01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
O3Y_04375 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AFC57755
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All DBs
Position
I:1003902..1005152
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AA seq
416 aa
AA seq
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MLKRDMNIADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEQDAKDLANWMCDVLDNINDQGVIEATKQKVLAICQRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgctgattacgatccggagctatacgctgccattcag
gaagagacgcttcgtcaagaagaacatattgaacttattgcttcagaaaactacaccagc
ccgcgtgtaatgcaagcacaaggttctcaactgaccaacaagtacgccgaaggttatcca
ggtaagcgttactatggtggttgtgagtacgtggacaaagcagaagctttagcgattgat
cgtgcttgccaactgtttggctgtgaatacgcgaacgttcagccgcactctggatctcaa
gcgaacagcgctgtgtacatggcgctgctcaacccaggtgacaccgtgctaggtatgagc
cttgctcacggtggtcatttgactcacggttcaccggttaacttctcgggtaagcactac
aatgtgatcccttacggtatcgatgaagcgggtcaaattaactacgatgaaatggaagcc
ttagcactggagcataagccaaagatgatcatcggtggcttctcggcttactcacaaatc
gtggattggaaacgcatgcgtgaaatcgccgataaagtgggtgcttacctgtttgttgac
atggcgcacgttgcgggtctgattgcggcgggtgtttacccaagcccagtgccttttgca
cacgttgtcacgaccaccacgcataaaacactggcaggtccacgcggtggcttgatcttg
tcaaatgccggtgaggagatgtacaagaagctgaactctgcagtattccctggcggccaa
ggcggtcctttgatgcacgtgattgcggctaaagcggtggcgttcaaagaagcaatggag
cctgagtttaaagagtatcaagcgcgtgtggtgaaaaacgccaaagccatggtggcgcag
ttccaagaacgtggttacaagatcgtctctaacagcacggaaaaccatttgttccttgtt
gatctgattgataaaaacatcacaggtaaagaagctgatgccgctctgggcgctgccaat
atcacggttaacaagaactcggtaccaaatgacccacgcagcccgtttgtgacttcaggt
atccgtgtcggtacaccagcaatcactcgccgtggttttaccgagcaagacgcaaaagat
ctcgccaactggatgtgtgatgttctagacaacatcaatgatcaaggtgtgattgaagcg
acgaaacaaaaagtattggcgatctgtcaacgtctgcctgtttacgcttaa
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