Vibrio cholerae O1 IEC224: O3Y_05895
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Entry
O3Y_05895 CDS
T01766
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vci
Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vci01002
]
O3Y_05895
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vci01011
]
O3Y_05895
Peptidases and inhibitors [BR:
vci01002
]
Cysteine peptidases
Family C82
O3Y_05895
Peptidoglycan biosynthesis and degradation proteins [BR:
vci01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
O3Y_05895
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFC58059
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Position
I:1340063..1341634
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AA seq
523 aa
AA seq
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MKSRVVAAIALLFFVIPCSATQRFVELGWIDSTSPVNEQITNPALVEQIYHSNNDQLLWS
DLATANHFEAQLEVIHRASFSPLFSRQLFALKSYRQQDRWHEYDVLATDTLLQYLSYAEQ
APKVGIAWFFEGQLDQPLAPPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQ
SLSSIEFNEVALYEQMERLKRPGDPLSHREALVQRLALVNLDTTSILNDVAYYDASLEKP
IKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSMIVVNVPGF
DMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDS
EYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSR
AIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQAIALKKR
IPVHIIYQTVWYEEGVLHYRDDIYHYDALALGNGDASPNLTKI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccgagtcgttgccgctatcgcattgttattctttgttattccgtgttctgcc
acccagcgttttgttgaattggggtggattgatagcacttcgccggtcaatgaacagatc
accaacccggctttggttgagcaaatctatcacagtaacaatgatcagttactgtggagc
gatcttgccacagcgaaccattttgaagctcagcttgaggtgattcaccgtgcgagtttc
agccctttatttagccgacaacttttcgcgctcaaaagctatcgtcagcaagatagatgg
catgagtatgatgtgttagcgaccgacactttactgcaatacctcagctatgctgagcag
gcaccaaaagtcggtattgcttggttttttgaaggtcaacttgatcaacctcttgctccg
ccgagtgaagaggcgcaactggctttgcatatggcgatcggtaaccagtcgctcgctcgc
ttaatggatgaatacaccccacaagaccctgcttatcaacaactgctgcaagcgtatcaa
tcactctcgagcattgagtttaatgaggtggcactatacgagcagatggagcggcttaag
cgtccgggtgacccattaagtcaccgtgaagctttagtgcagcgtttagctctggtgaat
ctggataccacatccatcttgaatgatgtggcctattacgacgcctcgcttgaaaaaccg
atcaagcagtttcagaagatgcatggcttgcagactgatggtgtgattggcccacaaacc
atgaagtggttgaacacatccgtaactgagcgccttgccttattagcgcttaatgcagag
cggattcgcttatggccaacccagcaagacagcatgattgtggtcaatgtgcccggtttt
gatatgaagtattgggatgccggccgcgaagtctttgaatccaaggtggtggtaggcaaa
accaccagaccgacaccggtgatgaataccaaactcgattcactgatcatcaatccaact
tggaatgtgccgcataaaatcatggtggaagatatcctaccaatggtgaaacgtgatagt
gagtatctcgccaatcatcatatggaaatcattcgtggttggagcgatccagaagtgatt
gaccctgcgctgattgattgggaagccgttgaaccggaaaccttcccataccgtctgcgc
caacaggctggcgtgcaaaatgcgcttgggacctataagtttaatacgcccaattcacgc
gctatctatctgcatgatacgccgagcaagcatctatttaataacgcgtctcgggcgttc
agttctggctgtattcgggtagaaaacgctgaaaagtttgcgcaaaccttgctcgctaat
cagggcattacgctcgacgattttccagtgagcacccaagcgattgcgctcaaaaagcgt
attccagtccacatcatctatcagaccgtgtggtatgaagaaggtgtgctgcattatcgt
gatgatatttatcactatgatgctttagcactcggcaatggtgacgcgtctccaaatttg
actaaaatttga
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