Vibrio cholerae O1 IEC224: O3Y_09800
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Entry
O3Y_09800 CDS
T01766
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vci
Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vci03009
]
O3Y_09800
Enzymes [BR:
vci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
O3Y_09800
Ribosome biogenesis [BR:
vci03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
O3Y_09800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
AFC58834
LinkDB
All DBs
Position
I:complement(2226197..2227144)
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AA seq
315 aa
AA seq
DB search
MNEIRTQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKL
EAGDVVRVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSG
LHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYA
LVMGHWDAECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRT
HQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAP
LEAHLEQALTKMRQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcagaactcaagtccagttcatcgacattgatgaagacatggctggtcag
cgcattgataattttttgcgcaaccaattaaaaaatattcccaaaagcgtggtttatcga
attctacgtaagggagaagtgcgcgtgaacaaaaaacgcgtaaaagcagaatacaagctc
gaagcgggcgatgtggtgcgtgtgcctcccgtcaccgtggaagtcaaagagaacgagcct
gctccaccgagtaccaaactcagtaaagtggcggaattagaacactgtattgtctatgaa
gacgatcatttactcatcctcaataaaccgtcaggtacggcagtgcatggtgggagcggt
ttacactttggtgccattgaagccttgcgcgccctgcgcccccaagcgcgttttcttgag
ttagtacaccgtattgaccgtgatacctcagggattttgctggtggccaaaaaacgctcg
gcactgcgccacttacaagctcagtttcgcgagaaaacggtgcagaagtactactacgct
ttagtcatgggacattgggatgcagagtgtaaagtggtcaatgcgccgttgctgaaaaat
gaagtcaacagcatagtgcgcgtgaaccccaacggtaagccgtcggaaacccgattccgt
attcttgagaagtttgctgaagcgacgttagttcaagcgagccctgtgactgggcgtacg
caccaaattcgtgtacacactcagtacatggggcatccaatcgcgtgggatgatcgttat
ggtgatcgccgctttgatgcttatacagcgcaatttgggattgagcgcctgtttttgcat
gcggcaaacatccaatttgtgcatcctgccagcgagaaaaagttggaaatccatgcgcca
ctcgaagcgcatttggagcaagctctgacaaaaatgcgtcaggcttaa
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