Vibrio cholerae O1 IEC224: O3Y_11300
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Entry
O3Y_11300 CDS
T01766
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O3Y_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vci03400
]
O3Y_11300
Enzymes [BR:
vci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
O3Y_11300
DNA repair and recombination proteins [BR:
vci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O3Y_11300
Prokaryotic type
O3Y_11300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
AFC59130
LinkDB
All DBs
Position
I:complement(2561183..2561863)
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AA seq
226 aa
AA seq
DB search
MSESLTWHDVIGNEKQQAYFQQTLQFVESQRQAGKVIYPPAKDVFNAFRFTEFGDVKVVI
LGQDPYHGPNQAHGLCFSVLPGVKTPPSLVNIYKELAQDIPGFQIPPHGYLQSWAQQGVL
LLNTVLTVEQGMAHSHANTGWETFTDRVIDALNQHRNGLIFLLWGSHAQKKGQMIDRQRH
HVLMAPHPSPLSAHRGFLGCRHFSKTNQLLQAQGIAPINWQPELES
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcactgacgtggcatgatgtcattggtaatgaaaagcagcaggcttacttt
caacaaactctgcaatttgtcgaaagccagcgtcaagccggaaaagttatctatcctccc
gctaaagatgtgtttaacgcctttcgctttaccgagtttggtgacgtgaaagtggtgatc
ttggggcaagatccttatcacggccctaatcaggcgcatggtttgtgtttctctgtgcta
ccgggtgtcaaaacaccgccctcgttagtcaatatttataaagagttagcgcaagatatc
cctggatttcaaatcccacctcatggctacctacaaagttgggcacagcagggcgttttg
ctactcaacaccgtattgactgttgaacaaggtatggcccattctcatgcgaataccggc
tgggaaaccttcacggatcgtgtgattgacgccttgaatcaacaccgaaatgggttgatc
ttcctattgtggggatcgcacgcgcagaaaaagggccagatgatcgatcgccagcgccat
catgtcttgatggctccgcacccttcaccgctttcggcgcacaggggctttttaggatgt
cggcatttctctaaaaccaatcaattgctgcaagcgcaaggtatcgctcccattaactgg
cagcccgagctcgaatcttaa
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