Vibrio cholerae O1 IEC224: O3Y_17953
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Entry
O3Y_17953 CDS
T01766
Name
(GenBank) transcriptional regulator, LuxR family protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
O3Y_17953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vci03000
]
O3Y_17953
Transcription factors [BR:
vci03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
O3Y_17953
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
TubC_N
HTH_24
GNVR
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AFC60405
LinkDB
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Position
II:complement(901252..901926)
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AA seq
224 aa
AA seq
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MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVID
YSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK
GMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA
DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaaaacaaactaaacgttagaatgctttctgatgtttgcatgcaatccaga
ttgttgaaagaggcgttagaatcaaaacttcctttggcgctggaaattacaccattttct
gagctctggcttgaagagaataaaccagaaagtcgcagtattcagatgctggtgattgat
tattctagaatttctgatgatgttttgaccgattacagctcgtttaagcacatcagttgt
cctgatgcgaaagaggtcatcataaactgtccgcaggatattgagcataagctgctcttt
aagtggaataatttggctggagtattttatattgatgatgatatggataccctgatcaaa
ggcatgagtaaaattttgcaagatgaaatgtggttaacgcgtaaactggcccaagaatac
attctccattatcgtgccggtaactcagtcgtgacctcacaaatgtacgcaaaattaacc
aaaagagaacaacagattatcaagttacttggtagtggtgcttctaatattgaaattgca
gataaactctttgtgagtgaaaatacagtaaaaacacatctgcataatgtctttaagaaa
attaatgccaaaaatcgcttgcaggcactgatttgggcgaaaaataatattggaattgag
gaagtcaattcttaa
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