Vibrio cidicii: ACSEYT_01735
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Entry
ACSEYT_01735 CDS
T11572
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vcid Vibrio cidicii
Brite
KEGG Orthology (KO) [BR:
vcid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcid03021
]
ACSEYT_01735 (rapA)
Transcription machinery [BR:
vcid03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACSEYT_01735 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Helicase_C_2
AAA_34
WWE
Flavi_DEAD
STB2_C
Motif
Other DBs
NCBI-ProteinID:
XXO36942
LinkDB
All DBs
Position
1:404647..407556
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYASNDAPVTRVIFNVGDV
VECQEGWSLRVEQVVEEKGLYTYLGTREDTEETGVALREIFLSNQIRFNKPQDKMYAGQI
DRMDNFVLRYRALKNQYEQHRSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLLGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFA
ESDNPFDTQQYVLCSLDFLRKSRKRFEQALEADWDLLVVDEAHHLEWSQDKPSRGYQVIE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDSDRFYDYEAFVEEEAQYAPVADAITALF
SGKLLPDEAKNQITELLSEQDVEPLFRIIESNADEESKAAARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLLPMPIPSQYTTSMRVSGMIGGKMTLEARAMKNLYPEEIFQEFE
GDDSSWWQFDSRVNWLLEKILAKRSEKILVIASRSSTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDIHVPYLQGTAQEVLARWFDEGLNAFAETCPTGRAVYDQYADTLIEILASGD
STPLEEVIAQSAKMNLELKAQLEQGRDRLLEMHSNGGEKAQQIVAEIAGKDGDTNLVSFA
LSLFDTIGLNQDDKGENAIVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTCAVSLLKNKALPVGTILLELIYAVDAQAPKRSGIGRFLPRT
PIRLMMDARGNDLSAQVEFEGFNRQLSPVNRHLASKLVSSVQQDIHRLIESGDALVVERV
EAIRQQAQQEMQQSLNGELERLQALKAVNPNIRDEELEAIDAQIKELSGYIGKAQYQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctctggggcaacgctggatcagcgatacggaaagtgatttgggtttaggt
acggtggtcgcattagatgcgcgaacggtgacattaatgttcgccgcttcagaggaaaac
cgtgtttacgccagtaacgatgccccagtaacccgagtgatttttaacgtcggcgatgtc
gttgagtgtcaagaaggctggtcactgcgtgtggaacaagtggttgaagagaaaggcctt
tacacttacctcggcacgcgcgaagacaccgaagagaccggagtcgcgctgcgtgaaatt
ttccttagtaaccaaatccgtttcaacaagccgcaagacaaaatgtacgccggtcaaatc
gaccgcatggacaacttcgtgctgcgttaccgcgcgctgaaaaatcagtatgagcagcat
cgcagcccaatgcgcggcctctgtggcatgcgcgctggccttattcctcaccagctttac
attgcccacgaagtgggtcgtcgtcatgcgccgcgcgtattactggcagatgaagttggc
ctaggtaaaaccatcgaagcggggatgatcattcatcaacaagtgctgcttggtcgtgct
gagcgcattttgatcgtggtgccggaaactttgcagcaccagtggctggtggaaatgatg
cgtcgtttcaacctgcatttctcgatttttgacgaagagcgctgcgttgaagcattcgcc
gaatcggacaacccatttgatactcagcagtacgtgctctgttcactggatttcttgcgc
aaaagtcgcaaacgttttgagcaagcgctggaagcagattgggatctgttggtggtcgat
gaagcgcaccacttggaatggagccaagacaaaccaagccgcggctaccaagtgattgaa
gggctagctgagcgcactccgggcgtattgctgctgaccgcgacccccgagcagcttggc
cgcgagagtcactttgcccgtctgcgcctgctggattcagatcgtttctacgactacgaa
gcgtttgtcgaagaagaagcgcagtacgcgccagttgccgatgcgatcactgcgctgttt
tcgggcaagctgctgcctgatgaggcaaaaaatcagatcactgaactgctttcggagcag
gacgttgaaccgctgttccgtattattgaaagcaacgccgacgaagagagcaaagctgct
gcgcgccaagagctgattgacaacctgatggatcgtcacggcacgggacgtgttctattc
cgtaacacccgtgcggccatcaaaggcttcccagtgcgtaacgtgcacctgctgccgatg
ccgatcccatcgcaatacactacctcaatgcgcgtttcaggcatgattggcggtaaaatg
acgctggaagcgcgtgcgatgaaaaacctttatccggaagagatcttccaagagtttgaa
ggggacgattcaagctggtggcaatttgactcgcgggtaaactggctgctggaaaaaatt
ctcgccaaacgcagcgagaaaattttggttatcgcctcgcgctccagcacggcattacaa
ctagagcaagcgctgcgcgagcgtgaaggcattcgcgccaccgtgttccacgaaggcatg
tcgattctcgagcgcgacaaagcggcggcgtactttgctcaggaagagggcggcgctcag
gtgctgatctgtagtgagatcggctcagaaggccgtaatttccagttcgctaaccagttg
gtgatgtttgatttgccgtttaacccggatctgcttgagcagcgaattggccgtttggat
cgcatcggacaaaaacgtgatatcgacattcatgtcccttacctgcaaggcactgcgcaa
gaggtgctcgcgcgttggttcgatgaaggcttgaatgcgtttgccgaaacctgcccaacc
ggtcgtgcggtgtatgatcaatacgccgatacgctgattgagatcctcgcatccggtgac
agtacgccgctggaagaggtgattgcccaatcggccaaaatgaacctcgagctaaaagcg
cagttagaacaagggcgcgatcgcctgttggaaatgcactctaacggcggcgaaaaagcg
cagcagatcgtggcagagatcgcgggcaaagatggcgataccaacttggtgagctttgcg
ctgagcctgtttgataccattggtcttaaccaagacgataaaggcgaaaacgcgattgtc
gttacgccatccgagcacatgatggtgccaagctacccgggcctaccgtacgaaggcgcg
accatcacgtttgaccgcgatacggcgctgtcgcgtgaagacatgcactttatcagttgg
gaacacccgatgattcagggcggtatcgacctgttgatgagcgaaggcgtcggcacatgt
gcggtgtcgctgctgaagaacaaagcgttgccagttggcacaattttgctcgagctgatt
tatgccgtggatgcccaagcgccaaaacgcagcggtatcggccgcttcctaccgcgcacg
cccatccgtttgatgatggatgcgcgcggcaacgatttgtcggctcaggttgagtttgaa
ggctttaaccgtcaacttagcccagtgaaccgtcatctggccagcaaactggtttcgtcg
gtgcagcaagatattcaccgtttgatcgagtctggtgatgcgttggtggttgagcgcgtc
gaagcgattcgtcagcaagcacagcaagagatgcagcaaagcctcaatggtgagctggaa
cgtctgcaagcactgaaagcggtcaacccgaatattcgtgacgaagagctggaagcgatt
gacgcgcaaatcaaagagctgagtggctacattggcaaagcgcagtaccagcttgattca
ctgcgtctgattgtggtcagccacaactaa
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