Vibrio cidicii: ACSEYT_09655
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Entry
ACSEYT_09655 CDS
T11572
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vcid Vibrio cidicii
Pathway
vcid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACSEYT_09655 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcid03400
]
ACSEYT_09655 (xthA)
Enzymes [BR:
vcid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACSEYT_09655 (xthA)
DNA repair and recombination proteins [BR:
vcid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACSEYT_09655 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF3014
Motif
Other DBs
NCBI-ProteinID:
XXO35691
LinkDB
All DBs
Position
1:2151376..2152182
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AA seq
268 aa
AA seq
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MKVVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVADVEAMGYKVYFHGQK
AHYGVALLCKQEPLSLQKGFPTDNDDHQKRMIIGTFLHENGEKVTILNGYFPQGDNVEHE
TKYPYKRQFYQDLMGYLNTHHSSDEKLIVMGDINISPIDADIGIGEVNRKRWLKTGKCSF
QPEEREWLKTLLDWGLEDTFRQLHPTVDDKFSWFDYRSRGFDDNRGLRIDVILATPSLAS
SCVESDVDYGLRGIDKPSDHAPIWAVFN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagtcagctttaatatcaatggcttgcgtgctcgcctccatcaactgcaagcc
cttatcgataaacatcagcccgatgtcattggtctgcaagagattaaggtacacgatgaa
gcctttccggtcgctgatgttgaggccatgggctacaaagtctatttccatggacagaaa
gcacactacggtgtcgctctgctgtgtaaacaagaaccgctgtcgctgcaaaaaggcttt
ccaacggacaacgatgatcaccaaaagcgtatgattatcggcacttttttacatgaaaat
ggcgagaaagtgacgattttaaacggttactttccgcaaggggacaacgttgaacatgag
actaaatatccttacaaacgccagttttatcaagatctcatgggctacttaaatacccac
cacagtagcgacgaaaaattgatcgttatgggggatatcaacatcagcccgattgacgct
gacatcggcatcggtgaagttaaccgcaagcgctggctaaaaacaggcaagtgctctttc
caaccagaagagcgcgaatggctaaaaaccttgctcgattgggggttggaagacaccttc
cgccaacttcatccaacggtggacgacaagttctcttggttcgactatcgctctcgcgga
tttgatgataatcgcggtctgcgtatcgacgtgatcttagcaaccccgtctctcgccagc
agttgtgtggaatcggatgtcgactatgggctgcgcggtatcgacaaaccctcagatcat
gcgccaatctgggcggtgtttaactaa
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