Vibrio cholerae O1 MJ-1236: VCD_000079
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Entry
VCD_000079 CDS
T00903
Name
(GenBank) TPR domain protein in aerotolerance operon
KO
K07114
Ca-activated chloride channel homolog
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_000079
Transporters [BR:
vcj02000
]
Other transporters
Pores ion channels [TC:
1
]
VCD_000079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_19
TPR_1
TPR_14
TPR_12
TPR_7
TPR_6
TPR_8
TPR_P4H
TPR-S
TPR_10
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ACQ62049
LinkDB
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Position
2:84367..86241
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AA seq
624 aa
AA seq
DB search
MSSLIFLYPHWLGLLVPLLLLAAWRGLRQNQRGLIAPHLAQALGIETRTRRSFGGVLALS
WIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARYKALDLLKG
WQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVSLAITMLQQ
SGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDGSLLKDRQG
QTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTSRQAITERVN
NGYWLVLPLLIAALCLFRRGVIFSLLLLFGVSLPNQQAWASAWLNQDQQAMRMFNNEQYA
QAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY
EHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQDSSSGASGQEAQE
DSSANPSNTAQEQEASSQTKGASTPDPQQDLQESTEPKANAKPQEQPNAVDDAQAGEPSA
HREQSKDSQNGQPSGTEQNDEQSDKANAAQPSTSVTTSSDPNLDPMLRKLEQVESARDPS
ALLRAQFILQAQRKPQPTEPDQPW
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttgatttttctctacccacactggttagggttgttggtgcctctgttgttg
ctcgccgcttggcgagggctgcgccaaaaccaacggggattgattgcccctcatctcgcg
caagcgttgggaattgaaactcgcacgcggcgctcttttgggggtgtattggcactcagt
tggatcgtcgctacccttgcgatggcgggcccaagctggcaatccgctgaacgtccgagt
gtgcaaaatagcgccgcacgtgtgttaattatggatatgtcacgctcgatgtacgcaacc
gacctagcgccaaaccgtttaacacaggcgcgttataaggcacttgatctcctaaaaggt
tggcaagaaggcagcacgggcttagtggcttacgccgccgatgcttatgtggtgagcccg
ctgacgagtgacagtgcaacgctcgccaatctgctgccgaatctctctccagacatcatg
ccttatcaaggctcagatgccgctgccgcagtgagtttagcgatcaccatgctccagcaa
tcaggtcatcagcaaggggatctgattcttatcaccgatgatatgagtgtgacagaacga
gaaaaattgatctcgttgttacaaggtagcccatggcgtttggtgacgcttgcgatcggt
actcctagcggcgcgcctattcctttaggtgatggtagcctgctaaaagatcgtcaaggc
cagaccgtgattgccaaaaccgcatttgaccaattacagcagctctcacaaagtgttcaa
ggcgtgctgactgcgtatcgtgcggatggcgcagatgtggcgcacatcctcagcctgact
cagcagccgattgatattgccgaatcgacttctcgtcaagccatcacggagcgcgtcaat
aacggttactggttagtattgcccctcttgatcgccgctttatgcctatttcgccgtggg
gtgattttcagcttactgctgcttttcggtgtgagtttgcccaaccagcaggcttgggcc
tctgcatggttaaatcaagatcagcaagcgatgcgcatgttcaacaatgagcaatatgcg
caagccgctgaagcctttcgcgatccacgctggcaaggcgctgctcgttactatgccaaa
gattaccaaggggccattgacgcctattcgcaaatcgctaaccctgatactgccacgcag
tacaatctcgccaatgcttatgcgcaagcaggagagttacagaaagcgcaggatttgtac
gaacacgttctcaagcaagagccgaatcatcaagatgcacgacacaatttagacgtggtc
aaagctgcacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacag
caacagcaacagcaacagcaggattcgtcatcaggcgcctccggtcaagaagcgcaagaa
gactcatcagcaaatccctcaaatacagctcaggagcaagaggcgagctctcaaacaaaa
ggcgcctcgacgcctgatccacagcaggatctacaagagagtactgagcccaaagcgaat
gcaaaaccacaggagcaaccaaacgctgtggatgatgcgcaagctggggaacccagcgcg
caccgggagcaatcaaaagattcgcaaaatggacagccaagtggaaccgagcaaaacgat
gagcagagtgacaaagccaatgccgctcagccatccacgtcggtcaccacctcttctgat
cccaatcttgaccctatgttacgtaagttggagcaagtcgagagtgctcgcgatccgagt
gcactactgcgcgcgcaatttattctgcaagcccaacgtaaacctcaacccacggaaccc
gatcagccatggtaa
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