Vibrio cholerae O1 MJ-1236: VCD_000101
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Entry
VCD_000101 CDS
T00903
Name
(GenBank) TRAP-type uncharacterized transport system fused permease component
Organism
vcj
Vibrio cholerae O1 MJ-1236
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ACQ62071
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Position
2:complement(111008..113149)
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AA seq
713 aa
AA seq
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MSNSVEQELEKFEVPTRTRFGWVTRTISVLCVLLSLAHIWFNTLSTWSELWISAIHFAGF
AMICALWYPALPRWRGSKVALAFDVLLALLALACLIYLMLAEDALYERGVKFVTSDWVFS
ILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSE
GMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMG
SVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYT
QIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLA
VLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVG
IGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLS
APALYKLLAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAHELISLVPAD
FVETLLQQSLGLEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFT
AWKIAKGLYLVPVLIAYTQLISWDVATVVTIGIFAIFGTYAMIGAIEGYLEGRLNLLWRL
LLAVIGVLLVWPSLPIWIRLVCVALFIAIFIYSGKTAARVERAHSAVRGAKSA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcagtagaacaagaactggaaaagttcgaagtgccgacccgtacccgtttt
ggctgggtaacgcgcacgatttccgtattgtgtgtgctgctgtcgctggcgcacatttgg
tttaatacgttatccacgtggtcagaattgtggatttcggccatccacttcgcggggttc
gcgatgatttgcgcgctgtggtatcccgccttgcctcgttggcgtgggagcaaagttgcg
ctggcgtttgatgtgttgttagcgctgctggcgctggcgtgcttgatctatttgatgctg
gcagaagatgcactctatgagcgcggcgtgaaatttgtcaccagcgattgggtgttctcg
attctcgcgatcttgattgtgatggagatgatccgccgcactatgggttggtttattccc
acgctgattttgatctgtctgacctatgtctcggtttggggcaaatgggcaggcggcatt
ttccattttcccggcttaagtgccgaaaccctgctgtatcgcagtttctattcctcggaa
ggcatgtttggctcgattgcggcgataagctggagcttcgtgttcatgttcatcctgttt
ggtgccttcttagtgcgctctggtgtcggcgattacatcatggatgtgtcacgcgctgcg
gcaggtaaagtggtggggggccccggttttattgctgtactggcttcgggtttgatgggg
tcggtgtctggatctagtgtcgcgaacacggtctctacaggcgttattaccattcccatg
atgaaaaaagcgggctttcccgcacgtttcgccgcaggggtggaagccgcagcttcgacc
ggtgggcaactcatgccgccagtgatgggcgcaggcgcgttcatcatggcgtcgtacacg
caaattccgtatgtggatattgttgcggtgtcgtttattccggcacttatctatttcctt
tccgttgcgtttttcgtgcgtattgaagccaaacgcatgggcgtacagattgtcactacg
agccaagagccgtttatgaaagtgctgctgtcggggtggcataacttgatcccacttgcc
gtgttagtgaccttgttggtggtaggctttaccccaacgtacgcggcgggcttgtcgatt
ctgtcggtgattgttgcttcgtggttttccaaaaatcacaaaatgggtcctaaagcgatc
attgaagcgttggagcaaggggcgaaaaacatggcgactaccgcggtattgctggtcggt
atcggcttggtgattaacgtgattagcacaacgggcatcggcaataccttctcattgatg
atcaacaactgggcaaatggcgatctgctgaccatgctggtgttgatcactttggcctct
ttagtgctggggatggggctgccagtaacggcggcgtacattgtgctgggtacgctttca
gctcctgcgctgtacaaactgctggccgaaagccagttggtggatttgatggtttcgggg
caattgccggaacaagccaaagcgattttcatgctggcggcgccggatcaactcagtttg
ctcaatgcgcctatggcggcggaaaaagcccatgagctgattagccttgtgcccgccgat
tttgtggaaaccttgctacaacaaagcttagggttagaagcgattggtctggctctgctt
tcagcgcaccttattatcttctggctctcgcaagacagtaacgtgacgccaccggtgtgt
ttgacggcctttgccgcagccaccattgccaaaaccccgccaatgcgcaccggatttacc
gcgtggaaaattgccaaaggcttgtatttggttcctgtgttgattgcctatacccagctc
atcagttgggacgtggccacagttgtcactatcggcatctttgcgatttttggcacttac
gccatgattggcgcgattgaaggctatctggaagggcggctgaatctcttatggcgtttg
ctgttggcggtgatcggtgtgctgctggtgtggccaagtttgccgatttggatccgttta
gtctgtgtggcgctgtttatcgctatctttatctactctggaaaaacggcagcgcgtgtt
gagcgtgcccatagcgcagtacggggagcaaaatctgcatga
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