Vibrio cholerae O1 MJ-1236: VCD_000157
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Entry
VCD_000157 CDS
T00903
Name
(GenBank) redox-sensitive transcriptional activator soxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcj03000
]
VCD_000157
Transcription factors [BR:
vcj03000
]
Prokaryotic type
Helix-turn-helix
MerR family
VCD_000157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_17
TetR_N
CaMBD
FJX1_middle
MmgE_PrpD_N
WHD_1st_NFRKB
PsaO_TMD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACQ62125
LinkDB
All DBs
Position
2:178241..178687
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AA seq
148 aa
AA seq
DB search
MEMTVGDVAQRAGVKVSALHFYEQKGLIHSWRNQGNQRRYDRSVLRRIAVIKAAQMVGLT
LEEIAEALAHLPKHEAPTRQDWQQMASHWHHFLDHRIQQLNALKEDLSGCIGCGCLSLES
CAIYNPKDIRAMTFADKTRLSHPEEWSR
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacagtaggcgatgtggcgcaaagagcaggggtgaaggtctcagcgttgcat
ttttatgaacagaaaggattgatccatagttggcgtaatcaaggcaatcaacggcgttac
gatcgtagtgtactgcgcaggatcgcggtgattaaggccgcacaaatggtcggactgacc
ttagaagagattgccgaagctctggcacatttaccaaaacatgaagcgcccactcgtcaa
gattggcagcaaatggcttctcattggcaccattttctcgatcatcggatccaacaatta
aacgcattgaaagaggacttaagcggctgcattggctgcggatgtttatctcttgagtct
tgtgctatctacaatcccaaagatattcgcgctatgactttcgcggataaaacacgctta
tcgcatccagaagagtggagccgttaa
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