Vibrio cholerae O1 MJ-1236: VCD_000180
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Entry
VCD_000180 CDS
T00903
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VCD_000180
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcj01002
]
VCD_000180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
VCD_000180
Peptidases and inhibitors [BR:
vcj01002
]
Cysteine peptidases
Family C82
VCD_000180
Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VCD_000180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
ACQ62148
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All DBs
Position
2:complement(207081..208001)
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AA seq
306 aa
AA seq
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MWWKVWVIGCALAVSWSINAAVFDLPIEGSSIVGNTQYHKVEKGETLADIAKKYDIGFLA
LMAANRGVDPFLPQEGFVISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVG
IGRIGRDTPVMQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRL
AYGSGEYLIHGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEP
DRSVFIEVHEPLTRSNGVKKNLVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEIAPPQ
WETIAQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggaaagtttgggtaatcggttgtgcattggcggtcagttggagtatcaatgcc
gccgtgtttgatctacctatcgaaggcagtagcatagtcggtaacacgcaatatcataaa
gttgagaaaggcgagactttagccgacattgcaaaaaaatacgatattggcttcctagca
ttaatggctgccaatcgtggagtcgaccctttcttaccccaagaaggttttgtcatctct
atccctgcaaagatcattttgccgaaagtggcctatgaaggcattgtgattaaccttgct
gagttacgcctttactatttccgtcctaatgaaggtaaagtgcatatcttccccgtcggc
attgggcgtatcggccgcgatacgcctgtgatgcaaacgtcaatcagcagcaagcgcaag
tacccaacttggacgccgccagcatcgattcgcaaagaatacaaagctaaagggattgat
ttgccgccagtcgtgcccgcaggcccagaaaacccgctcggtgattacgcgatgcgtttg
gcttatggttctggagaatatctgattcatggaaccaacaaagattttggcgtaggcatg
agggtgagtgctggttgcattcgtatggatccgaaagacattgagtggctttaccaacaa
gttgaacgtggagaaaaagttcggattatcaacgaaccgatcaaagttgcgcttgaacct
gatcgtagtgtgtttattgaagtgcatgagccgcttacccgcagcaatggcgtgaagaaa
aacttggtggtaccagaagagctgagttggtggctgcaagagcataaaatctctgatgca
aaagcgcgcgccgcagttttagcacaaaatggggttccggtcgaaattgctccaccacag
tgggaaactatcgcccagtaa
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