Vibrio cholerae O1 MJ-1236: VCD_000181
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Entry
VCD_000181 CDS
T00903
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcj03400
]
VCD_000181
Enzymes [BR:
vcj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VCD_000181
DNA repair and recombination proteins [BR:
vcj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VCD_000181
Prokaryotic type
VCD_000181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACQ62149
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All DBs
Position
2:complement(208010..209419)
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AA seq
469 aa
AA seq
DB search
MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ
QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSE
QGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSA
LAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSLS
PYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDFV
EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHID
WRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRRW
VPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTAKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagactggtttggtttcgtcgtgatctgcgcagctttgataatacagcgctcaccgcc
gcgttaaacagtggcgatccggttgcggcgatgtatatcgctactccagagcagtggcat
cagcaccatctagcgcctattcaagccgatttgatttggcgacgtttggcagagttgcaa
caagagcttgctgcgcttaacgtgccacttttttatcagcaagtcgcggattttcaagcg
gcggctgtggcggttagccagttggcgaaaacacttaatgccacacaagttctcgccaat
cgtgattacgaattggacgagcagcaacgtgatcaattggcacagcaattactgagcgaa
caagggataatatggtctgcttttgatgataaatgcgtattacctcccggttcggtgcgc
acgaaacagggcgaattttttaaagtgttcacccctttcaagcgcgcatggctcactcta
tttcagccgcctgtgattggaaaaaatcgtcccgtagcgctttggaacgtaccgagtgcg
ttggccgaattggtttggcatccagaacaagcattcgattaccccagaatagacagcacg
ccatgggctgcggactttgagactgtgcgcgctcaattgcgtgatttttgccgtgaacga
gtgcaggactaccatcaagcgcgtgattttccggctagggaaggcaccagttcgctctca
ccctacttggcgattggtgtgttatcggcgcgtcaatgcgtggctcgcttgtatcacgag
tcatcaatgggcgaactcagtgaaggggcacaagtctggttgagcgaactcatctggcgt
gagttttaccagcatttggttgcaattgagcctaatctttcgaaaagtcgtgactttgtg
gagtggggggcgcgtttggagtggtggaatgataacgaaaagttccagctctggtgtgaa
ggcaagacagggtatccgatcgtcgatgcggcaatgcgccaactgaaccaaaccggatgg
atgcacaatcggttacggatgatcgtggcgagctttcttaccaaagatctacacatcgac
tggcgctggggagagcgctatttcatgagtcgcctgattgatggtgattatgcggccaac
aatggtggttggcagtggtgtgcatccactgggtgtgatggacagccctattttcggatt
tttaatccggtcagtcagggggagaaatttgacccgaatggcgacttcatccgccgttgg
gtgccggagctgcgttcagtttcttcggcttatattcaccaaccttggacttatccggct
gtcaatagcgtgttatatcctgcgcgactagttgatcataagcaggaaagagaagtaacc
ttacgtctgtataaaacagcgaagggataa
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