Vibrio cholerae O1 MJ-1236: VCD_000217
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Entry
VCD_000217 CDS
T00903
Name
(GenBank) 1,4-alpha-glucan (glycogen) branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00500
Starch and sucrose metabolism
vcj01100
Metabolic pathways
vcj01110
Biosynthesis of secondary metabolites
Module
vcj_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VCD_000217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcj04147
]
VCD_000217
Enzymes [BR:
vcj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
VCD_000217
Exosome [BR:
vcj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VCD_000217
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
ACQ62185
LinkDB
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Position
2:complement(254135..256276)
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AA seq
713 aa
AA seq
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MARAAFADPFSFLGPYIPAEQGALRVWMPGADNVALVVEGQARVALEREGEGGFVLKDGR
NLRFTHYQLAVDWAGTEQLLDDPYQYHGLYAEYEDLHTPKQMYHHMGAQFVTLERDGKMV
SGVRFLVYAPHAAACSLIGAFNHWDGRRHPMQRLDYGIWGIFIPGLPEGTQYKFELKGPH
GEGLPHKADPWGFYAEQYPSFASVTYDHRRYQWQDTAWQQRPVTEKRKQALSFYELHVGS
WKRGENGEFLNYRELADQLVPYLVEMGYTHVELMPVAEHPFYGSWGYQPVGLFAPTSRYG
SPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDSHGLANFDGTPLFHDPDPRRGWHQDWNSY
IYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLDYSRSHDQWIPNVDGGRENY
DAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGFGFKWNMGWMHDSLSYI
KEDPVHRKYHHNTLTFPLIYAFSENYVLSLSHDEVVYGKRSLMYKMPGDEWQQTANLRAY
LGYMYGQPGKKLNFMGTELGQTAEWDHDGQLQWFLTQFERHAGIQRLVRDLNHLYQAQTA
LHQLDCDPRGFEWRLQDNADLSVIAHERMDEAGNRVLVITNFTPVPQQEFRLGVPKTGKY
RLLLNTDAKQYNGSDYPVLQDVSTEAISSEGLDQSLLLSVPPLATLFYQWSAK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgtgcagcctttgctgatcccttttcatttctaggcccttacattcccgctgaa
caaggtgcgctgcgagtgtggatgccgggtgctgacaacgtcgcgttggtggttgaaggg
caagctcgtgtggcgttagagcgtgaaggcgagggcggctttgtgctgaaagatggccgt
aatctgcgttttacgcactaccaattggctgtcgattgggcgggtaccgagcagttactc
gatgatccgtatcaatatcacggcctctacgctgaatatgaagatctgcatacgccaaag
cagatgtatcaccatatgggggcgcagtttgtcaccctagagcgtgatggaaaaatggtc
tctggcgtacgttttctggtgtatgcccctcacgcggcggcgtgcagtttgattggcgcg
tttaaccattgggatggtcgtcgccatccgatgcagcgtctcgattacggtatttgggga
atttttatccccggcttgccggaaggcacgcaatacaaatttgagctgaaaggcccacat
ggagaaggtctgccgcataaagcggatccgtggggtttttatgctgagcaatacccttct
tttgcttctgtgacttatgatcatcgtcgttatcagtggcaagatacggcttggcagcag
cgccctgtgactgaaaagcgtaaacaagcgctctcgttttatgagctgcacgttggctca
tggaagcgaggcgaaaacggtgaattcctcaattatcgtgaattggctgatcaattggtg
ccttatctggttgagatgggttatacccatgttgagttaatgcctgtcgctgagcaccca
ttttatggttcttggggctatcaaccggttggtctgtttgcgcccactagccgttacggc
tcgccggatgatttcaaatattttgttgatttgtgccaccaagcggggattggtgtggtg
ctcgattgggtgcctgcgcacttcccatcagattctcacggtctggccaattttgatggc
acgcccttattccatgatccggatccacgtcgcggttggcatcaagactggaactcttac
atctacgatcttggtcgcgagcatgtgcgccgtttcttagtcgctaatgcgctgtattgg
tttgagatgttccatatcgatggcattcgtgttgatgcggtcgcatcgatgctctatctc
gattattcgcgtagccatgatcaatggatcccgaatgttgacggtggacgcgaaaactac
gatgcgattgctaccttcaaatggatgaacgaggaggtatacaaacacttcccgaatgcg
atgacgattgccgaagaatcgacggctttccccggtgtttctgccccgacctttatgggc
ggcctcgggtttggttttaagtggaacatgggctggatgcacgatagcttgtcgtacatc
aaagaggatccggtgcatcgcaaataccaccacaataccctgactttcccgctgatttac
gcgtttagtgaaaactatgtgctctctttatcacacgatgaagtggtgtatggtaagcgc
tcacttatgtacaaaatgccgggtgatgagtggcagcaaaccgccaacttacgcgcctac
ttgggttatatgtatggtcagccgggcaaaaaactcaactttatgggtaccgaattagga
cagactgcggagtgggatcacgatggtcagttgcagtggttcttaacgcaatttgagcgc
catgccgggatccagcgtttggtgcgcgatttgaaccatctgtaccaagcccaaacggcg
ttgcatcagcttgattgcgatccgcgcggcttcgaatggcgcttacaagataatgccgat
ctcagcgtgatcgctcatgaacggatggatgaagccggtaatcgtgtgttagtgatcacc
aacttcacgcctgttccacagcaggaatttcgcttaggcgttcctaaaacagggaagtac
cgcttgttgctcaataccgatgccaagcagtacaacggcagtgattatccggtattgcag
gatgtgagtacggaagcgatcagcagtgaaggtttggatcaatcgctgctattgagtgtg
ccgccgctcgcgacgctattttatcaatggagtgcgaagtag
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