Vibrio cholerae O1 MJ-1236: VCD_000312
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Entry
VCD_000312 CDS
T00903
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00500
Starch and sucrose metabolism
vcj01100
Metabolic pathways
vcj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VCD_000312
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VCD_000312
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
ACQ62280
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Position
2:complement(366485..368455)
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AA seq
656 aa
AA seq
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MKMNLSTPFPLGATLDAEGCNFAIYAPANRDILLALFHADGSYETHQLEHEYAGVKHTHI
SGIHAGQKYGYLIQLNDELHYISDPYARALEGPLHYAPPFDSHKSFDLPKCVVTDTHFDW
QNVAKPRIARDEMVLFETHVKGLTQLNPDVEKALRGKYLGLVSQPMLDFYRQQNINTLQL
LPIAACMHEPHLLESGKVNYWGYNPYVFMAPDPRYASKDAVNELKTTIRELHRNGIQVIL
DVVYNHTAEGGTNGPVFNLKALDPNYYLHHGDHYANYTGCGNTVDLSNQAALNLVMDTLR
CWVTEYQIDGFRFDLAATLGRRGDEFSKEAAFFKAVAQDPVLREVKLIAEPWDIGPNGYQ
VGNFPFGWNETNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSAANWPYKLTVNYITY
HDGFTLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMA
SLLFAFGIPHILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFREWLAGMVAARQ
TYMVPFIRAFSGENRNNNRIAWRRVDGKPMEMDDWNRLSSVALHIGIGSDGPEMLYLINQ
TNAPARFVLPKDRQQDWRLICDTNMRHAQHGHAEGEVLQLPVSMSILHYQPKKKSA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaacctgtcaacgcctttcccattaggagcaacactcgatgcagagggttgt
aactttgcgatttatgctccagccaatcgagatattctcttggctctctttcatgctgac
ggtagctatgaaacacatcagcttgaacatgaatatgcaggggtcaaacatacgcatatt
tctggcattcatgctgggcagaaatacggttatttaatccagctcaatgatgaattgcat
tatatttctgacccttacgctcgagcgttagaagggccgctgcattatgctccgccattt
gacagccataaaagttttgatctgccaaaatgtgtagtcacagatacccactttgattgg
caaaacgtggctaagccgcgtatcgcccgagatgagatggtgttatttgaaacccatgtc
aaagggttaacccaattaaatccggatgtagaaaaagccctacgtggcaaatatttaggg
ttggtgagccaacctatgctggatttttatcgccagcaaaatattaatactctgcagcta
ctcccaattgcagcttgtatgcatgagccccatctcttggaaagtggcaaggtcaattat
tggggttataacccttatgtatttatggcccccgatccacgttacgcaagtaaagacgcc
gtcaatgaactaaaaaccaccatccgtgagctgcatcgcaacggcatccaagtcattttg
gatgtggtgtataaccacactgcagaaggtggaaccaatggaccggtgttcaacctcaaa
gcccttgatccaaactactatctgcaccatggcgatcactacgccaactacacgggatgt
ggcaacacggtcgatctctccaaccaagcggctctgaatttagtgatggacacgcttcgc
tgttgggtaacagaatatcagattgacggttttcgtttcgatttagccgccaccctcggc
cgacgtggtgatgagttcagcaaagaagcggcctttttcaaagccgttgcacaagatccg
gtgctgcgcgaagtaaagctgattgccgaaccttgggacattggccccaatggctaccaa
gtgggtaactttccttttggttggaatgaaaccaacgacaaactacgcgatattacccgt
agcttctggcgtggcgacctaggctttttgaaggagtttgcaacacgcctcatgggttca
cgcgacctctacagcgcggctaactggccttacaaactgaccgtcaactacatcacctat
cacgatgggtttacgctgcaagatttagtgtcttataaacacaaacacaacgaagcgaat
ggcgaacaaaaccgcgatggccatggtgataaccgctcagacaactacggttttgaaggt
gacaccgacagtatcgtgatccgcgcgactcgtgagcggcagaaacgtaactttatggct
agcctgctgtttgctttcggtattccacacattctcaccgccgatgtgctctcacacact
caaaaaggcaacaataacgcttactgtcaagacaacgacatcagctggttaaactgggaa
aacaacgaaaccaaacaagattttcgtgaatggcttgccggtatggtagcagcaagacaa
acctacatggtgccctttattcgcgcatttagtggcgaaaaccgtaacaataaccgtatt
gcttggcgtagggtggatggcaaacctatggaaatggatgactggaatcgcctctcctcg
gtcgccttgcatatcggcatcggtagtgatggccctgaaatgttgtatttgattaatcaa
accaacgcgccagcgcgctttgtgctccctaaagataggcagcaggattggcgtttgatt
tgcgataccaatatgcgccatgctcagcatggtcatgctgaaggtgaagtgttgcaactg
cctgtttcaatgtcgattctgcactatcaaccaaagaaaaaatcggcttaa
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