Vibrio cholerae O1 MJ-1236: VCD_000337
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Entry
VCD_000337 CDS
T00903
Name
(GenBank) L-rhamnose operon transcriptional activator RhaR
Organism
vcj
Vibrio cholerae O1 MJ-1236
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Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
HTH_Tnp_1
TetR_C_5-like
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACQ62305
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Position
2:complement(389869..390702)
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AA seq
277 aa
AA seq
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MMSDSAGKIKEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTG
GNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQA
VVYDPELASQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLL
LVKEFLDDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQ
GVSISETAQECGFHDQSHLHRHFKKALGITPKQYARP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgatgagcgactcagccggcaaaattaaagagcaagcaaaatttcagattgccgaagaa
tttggcggccttgagctgcttgatgcgcaatacgaaacacagaatttttctcgccacagc
catgaagggtataccgtgggtgtgattgagcgcggtgcacaatctttctaccgcaccggc
ggcaatcatattgcgccgcaagacagcattattttggtcaacgccgatgaagtgcacacc
ggacactccgccgtcgaaggtggttgggcgtataaagccatgtacccgctgcccgagcaa
tttgccacggtcgccaaagagatcggtgccaataccggcgcgccttattttccacaagcg
gtggtatatgatcccgagctcgcgagccaactgcgcttagtgtttgaaacccttgagaaa
tcgactaaccgcttgctacgtgaaaccctgatttacgccagcttagtcaagctgatgaca
cgccacggccgcacagcgccacaggctgatcaaccgctatctgcactacgcccattattg
ctagttaaagagtttctggatgattttccgcaggccgatgtttcactcgaagagctggca
caactggcgggattaagtccttttcatctggtgcggacgtttcaaaaacagtttggtttg
ccaccccacgcttatcaaatccaagcccgcttgcgcctcgcgaaaaccctgttaaagcaa
ggcgtaagtatctcggaaaccgcgcaagagtgtggctttcacgatcaaagccatctgcat
cgccactttaaaaaagcgctcggcatcaccccaaaacagtacgcaagaccttag
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