Vibrio cholerae O1 MJ-1236: VCD_000487
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Entry
VCD_000487 CDS
T00903
Name
(GenBank) deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00240
Pyrimidine metabolism
vcj01100
Metabolic pathways
vcj01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VCD_000487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcj02044
]
VCD_000487
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VCD_000487
Secretion system [BR:
vcj02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VCD_000487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
APOBEC_N
HVO_2753_ZBP
CxC5
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
ACQ62449
LinkDB
All DBs
Position
2:complement(560760..561245)
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AA seq
161 aa
AA seq
DB search
MISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQNRIVSVGFNGYPHGISDSASTDDRDM
KYLKTLHAEENAILFAKRDLDGCEIYVTHFPCPNCAAKIIQTGISAVHCPEQSEDFLSRW
GDKIKVSQDMFLQAGVKVHWLPLVELKHINTIELPSESSNP
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaatgggcgcaacgttttttccaaatggctgaattagttggctcgtggagt
aaagatccttccacgcaggtaggcgctgtgatcaccaaacaaaaccggattgtctccgtt
ggcttcaatggctacccacacggtatctctgacagtgccagcaccgatgaccgtgatatg
aagtatttgaaaacgctgcacgcggaagagaatgcgattttgtttgccaagcgtgatttg
gatggctgtgagatttacgtcacccacttcccttgccctaattgcgcggccaaaattatc
caaactgggatctctgccgtacattgtcctgagcaatccgaagattttctgtcacgctgg
ggcgataaaatcaaagtcagccaagacatgttcttacaagctggggttaaagtgcattgg
ctacctttggttgaactgaagcacatcaatacgattgagctgccttcagaatcgagcaat
ccataa
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