Vibrio cholerae O1 MJ-1236: VCD_000504
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Entry
VCD_000504 CDS
T00903
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VCD_000504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcj03019
]
VCD_000504
03110 Chaperones and folding catalysts [BR:
vcj03110
]
VCD_000504
03029 Mitochondrial biogenesis [BR:
vcj03029
]
VCD_000504
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcj04147
]
VCD_000504
Enzymes [BR:
vcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VCD_000504
Messenger RNA biogenesis [BR:
vcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VCD_000504
Chaperones and folding catalysts [BR:
vcj03110
]
Heat shock proteins
HSP60 / Chaperonin
VCD_000504
Mitochondrial biogenesis [BR:
vcj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VCD_000504
Exosome [BR:
vcj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VCD_000504
Exosomal proteins of other body fluids (saliva and urine)
VCD_000504
Exosomal proteins of breast cancer cells
VCD_000504
Exosomal proteins of colorectal cancer cells
VCD_000504
Exosomal proteins of bladder cancer cells
VCD_000504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
ACQ62466
LinkDB
All DBs
Position
2:complement(578102..579694)
Genome browser
AA seq
530 aa
AA seq
DB search
MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI
ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI
DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG
QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV
AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV
ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY
DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA
ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacacgttctgttttcaaccgacgccagacagaaaatgcttagtggcgta
aatttactggccaacgccgtcaaagttacgctcgggcccaaaggtcgccatgttgtgctc
aataaatcttatggtgcgccaaccatcactaaagatggcgtctctgtcgccaaagagatt
gagctcgccgataaattcgaaaacatgggcgcacaaatgctcaaacaagtggcgtccaaa
gccaacgacgaagcgggcgatggcactaccacagcaaccgtgttggcccaagcgctgatc
aatgaagggatgaaggcggtcgccgctggcatgaaccccatggatcttaagcgcggtatc
gacaaagcagtctccgcagcggtcgagaaattgcaccaactggccaaaccttgcagtgac
acccaatcgatcactcaagtcggtgccatttccgctaatagcgatcacgcgatcggtgaa
atcatcgcgcaagcgatggagaaagttggccgcaatggtgtgatcacggttgaagaggga
caagctctacaaaacgagctttcggtggttgaaggtatgcaatttgatcgcggttacctt
tccccttacttcatcaaccaacccaaagcgggctgtgttgagttggagaatccctacgtc
ttgctagtagacaagaaaatcagccacattcgtgaactgctaccgattttagaatccgtg
gctaaagcttcccgttcgctgctgatcattgctgaagatgtggatggcgatgcgcttgcg
acattagtggttaacagcatgcgtggcatcattaaagtggcagcggtgaaagcgccaggc
tttggtgaacagcgcaaagcaatgctcgaggacatcgcggccctcactgctggccgagtg
attagcgaggaaataggtcttgagcttgaaaaagtgacgctggacgatctgggtagcgcg
aaaaaagtcaccatcaataaagacaataccacgattgtcgatggcgctgccgagccaagt
gccctccaagatcgcatcgcgcagatccaacatcaattggaacacaccacatcgcaatac
gatcgggacaaattgcagcaacgcattgccaaactctctggtggggttgctgtgatcaag
attggtgcggcaacagaagtggagatgaaagagaaaaaagatcgcgtggatgatgcattg
cacgccactcgcgccgcagtggaagaagggattgtggccggcggtggtgtcgctctgctg
aaaattgccaacgagctcagcaatttacaaggtgataatgacgatcaaaatgtcggcatt
cgcattgcgctaagagcgatggaagaaccactgcgtcaaatcgccatcaacgcaggggat
gaagcttcagtgatcgcaaatcaagtcaaaacgggcgatgagcattacggctacaacgct
gccaccggccaatttggcaatatgttagagatgggcattttggatcctgcgaaggtgaca
cgctcagcgctacagtttgccgcaagcattgctggcttgatgatcaccaccgaagccatg
gtcagcgaagtagacaaagagtctgcggcgtaa
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