Vibrio cholerae O1 MJ-1236: VCD_001090
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Entry
VCD_001090 CDS
T00903
Name
(GenBank) hypothetical protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_001090
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VCD_001090
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GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACQ59273
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All DBs
Position
1:complement(71950..73182)
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AA seq
410 aa
AA seq
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MDSFIAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVE
SDKLCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDV
TRTVFENWHDYLSLFDFVKIDTRRIDDDFLKLFFSLKPICCIALAEKVETNEQLESLKKN
GFLLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTVGLL
KYVNTIGKPLKPISSIQHAIVYLGLEQLRMFVFLLCSSTIHDKLDLDKYVYVLTRAKFCE
LMMGEIDHKLSSMAFISGMLSLSHLFLPNDNSELLSSLPISNDMRDAVLCRAGILGDVIS
ASEAYQNAKWCEALDFLNKYKIKIDGGLSKLYMDAIEWSSECRTLMKEVK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatagtttcatagcaaaacaggcgattacagatgagaacttaactatcgttggttat
gagttgctgtttaggaatagtgagaaaaatagatatcctgaaggtgtttctgaaagttta
gccacaaaaaaaatcatttggcaacagtttgttgatgatactatagatagagtggttgaa
tctgataagctatgttttattaactttcctgaagatttgctaatagatggctacgcggaa
atcttgcctaaagataaggtggttatagaggtactagagaatactattcctactgaaaag
ttgctttccgttattcggggattaagagaaaagggatatttattcgcgttagatgatgtt
actcgtactgtttttgaaaattggcatgattatctatcattatttgactttgttaaaatc
gatactcgccgtatagacgacgattttctcaagttgtttttcagccttaaacctatttgt
tgtattgcattagctgagaaagtcgaaaccaatgaacagctagagagccttaaaaaaaat
ggttttctattgtttcaaggtttctatctcgatcgccctaaagttctcaggtgtgcaaca
actgagtatgcaaatactgagtcttttgagctgcttatcgaagtaattaaaagagatttt
aaccctagtagattggaattaattttaatccgaaatcctaagcttacggtagggttattg
aagtatgtcaacacaattggaaagccattaaaacctatttcatctattcagcatgcaatt
gtatatctaggtcttgaacaattaagaatgtttgtttttctactttgcagttctacgata
catgataaacttgacttggataaatatgtttacgttttaacacgagcaaaattctgtgaa
ctaatgatgggtgaaatagatcataaacttagctcaatggcatttatttcaggtatgcta
tcgcttagtcatctattcttgccaaatgataatagtgagttattatcaagccttccaata
tctaacgatatgcgagatgccgtattatgtcgagccggaatactaggtgatgtcatatca
gcttctgaagcataccagaatgctaaatggtgtgaggctttagattttttaaataaatat
aaaattaaaatagatggtggattaagtaagttgtatatggatgccatagaatggagttca
gagtgtcgaactttaatgaaagaagttaaatag
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