Vibrio cholerae O1 MJ-1236: VCD_001253
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Entry
VCD_001253 CDS
T00903
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCD_001253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcj03032
]
VCD_001253
Enzymes [BR:
vcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VCD_001253
DNA replication proteins [BR:
vcj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VCD_001253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
nSTAND3
GvpD_P-loop
divDNAB
BRCT
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACQ59426
LinkDB
All DBs
Position
1:complement(252240..253646)
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AA seq
468 aa
AA seq
DB search
MADPRTDNRNRKIPDAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSR
PHRLIFDGVKSILEAGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYA
EIVAERALVRNLIGVANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVD
SILERTLERIELLYKTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMN
LCENAAMEQDKPVLIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGI
LMEKKNMYIDDSSGLTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALTDNRTLEIAE
ISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YHPDSPLKGTAEIIIGKQRNGPIGSVRLTFQGHYSRFDNYAGPAFDDE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccacgtactgataatcgaaaccgtaaaattcccgacgcacaagtcgatgca
attaaagtcccaccgcattcattagaagctgagcaatccgtcattggtggcttgctgctg
gataatgagcgctgggatacggtctcagaacacgtgatgactcaggacttctacagccgc
ccgcatcgtttgatttttgacggggtaaaatcgattttggaggcgggtaaaccgctcgat
ctcattaccttgtccgaatatcttgagcagcgtgagcagttggaagatgtcggtggcttt
gcctatttggccgatttggccaaaaacacgcccagtgctgccaacattaatgcctatgcg
gagattgtggccgaacgggctttggtgcgtaatctgattggtgttgccaatgagattgcc
gatgcgggatacgatccacaagggcgcaacgctgaagatttgctggatctggcggaaagt
aaagtttttgcgattgccgaagcgcgtaccagtgaaaatgaaggcccgaaaaacgtggat
agcattctagagcgcacgctagagcggattgagctgctctacaaaacgccgcaggatggg
gtcactggagtgaacacgggctttaccgacctgaataaaaagacggctggtttgcaaggc
tcggatctgatcatcgtcgcagcgcgtccttcgatgggtaaaaccacttttgcgatgaac
ctgtgtgaaaacgccgcgatggagcaagataaacctgtgctgatcttctcgctggagatg
cccgccgaacagatcatgatgcgtatgctggcctcgttatcacgtgtcgaccaaaccaaa
attcgtaccggtcaactggatgatgaagattgggcgcgtatctcttccaccatggggatt
ctcatggagaagaagaacatgtacatcgatgatagctcaggcctaacccccaccgaagtt
cgctcgcgtgcccgacgcattgctcgtgaacacggaggcttgtcgctcatcatggtcgac
tatttacagctgatgcgtgtaccggcattgaccgataaccgtacactggaaattgctgaa
atttctcgctcactcaaagcgttagctaaagaattgaatgtgcccgtggttgcgctttcg
cagttgaaccgttctttggagcagcgtgcggataagcgtccagtcaactcggatctgcgt
gaatcgggttcgattgagcaggatgctgacttgatcatgtttatctatcgagatgaggtg
tatcacccagatagtccgctaaaaggcacggcggaaatcattattggtaagcaacgtaac
ggcccgattggttcggtgcgtttgactttccaaggtcactattctcgtttcgacaactat
gctggacctgcatttgacgatgagtaa
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