Vibrio cholerae O1 MJ-1236: VCD_001279
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Entry
VCD_001279 CDS
T00903
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiB precursor
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VCD_001279
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
VCD_001279
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcj03036
]
VCD_001279
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
VCD_001279
Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
Peptidoglycan biosynthesis and degradation
Amidase
VCD_001279
Chromosome and associated proteins [BR:
vcj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VCD_001279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
LysM3_LYK4_5
AMIN
LysM1_NFP_LYK
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ACQ59452
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Position
1:complement(273175..274893)
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AA seq
572 aa
AA seq
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MLNVSRFVFLLFGFVLLAIAPQTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSP
ERLVVDLKQSTSRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPT
PGGQYGHRLVIDMPHGKVSESSSASTPSSPAQVSKDASQLLGNDDIVVAIDAGHGGEDPG
SIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLV
SVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVS
QTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFI
SNPSEEKLLIQRSHQDKLARALATAIVQYFEDNPPEGTLFANRGKAQKHKVQRGESIGLI
ANQYGVSVDALKKANNLKSSTISVGQLLTIPASSAPNPVPVPVMANPVETETITHVVKTG
DFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKITVSLKDKPLRKHKVQRGEFLSKIA
DQYNVSVDSIRQANQLRTDQLLVGQQLIIPNK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgttagccgttttgtattcttactctttggattcgttttactcgcgatcgct
cctcaaacttgggcgaacgttttggaaggcgtgcgcgtgtggccttctcctgatgagaca
cgagtggtattagatgtcaaatccgaggtggattacagctactttaccctcagctctcct
gagcgcttggtggttgacctcaaacagagcacctctcgcgctaagttaccggttaatgtc
actgaaagtggcattttatcgaaagttcgcgcttcatctccccctgaaaaaagtacattt
cgtttggtgtttgagctcaaacaaaaaacaacgccaactttatttaaattggctccgaca
cccggtggtcaatatggccatcgtttagtcattgatatgccacatggcaaagtgagtgag
agctcttccgccagcacgccgagttcacccgctcaagtcagtaaagatgcctctcaactc
ttagggaatgacgatattgtggtggcgattgacgcgggacatggcggtgaagatcctggt
tccattggtcctacacgcaaatatgaaaaagacatcaccttgagcgtgtctaaaaagttg
gcggatcaactcaatgcagtgccgggaatgaaagcggtactgactcgccgtggtgactat
tttgtaaatctgaataaacgtacggaaattgcgcgtcgtagcaaggcgcacttgttggtt
tcggtgcatgcggatgcgtttcatactccacagccgcgcgggggatcggtgtttgtgctg
aatacccgccgtgccaataccgaaattgcccgttgggtggaaaatcacgagcaacaatct
gaattgctgggcggtgctggcgaagtactttcgaaaaccaataacgatcgtaacgtgagt
cagaccctactggatctgcagtttagccattcgcaaaaagagggctataaagtcgcgacg
aatattttgcgtgaaatgggcaaggtggcgcatctgcataaaaccgaacccgttaatgca
agtttggcggtattgaagtcaccagacatcccatcggtactggtggaaacaggctttatc
tctaacccatcagaagaaaaattgctgattcagcgcagtcatcaagataagttagctcgc
gctttagccacggcgattgtgcagtactttgaagataatccgccagagggcacactgttt
gccaaccgaggtaaagctcagaaacacaaagtgcagcgtggagaatcaattggtctgatt
gctaaccagtatggggtcagtgtcgatgctttgaaaaaagccaacaacctcaagtcttcg
acgatttcggttgggcaactgctgactattccagcttcttcagcaccaaacccagtacct
gttcctgtgatggcaaatcctgtagaaacggaaactattacccatgtggtaaaaacgggc
gattttctcggtaaacttgccaccacctataaggtttcagtggcttcgataaaaaaagag
aacaatctgaaatcggatactctagtgctcgggcagaagctgaaaatcacggtgagttta
aaagataagccgctgcgtaagcacaaggtgcagcgcggtgaattcctgagcaaaatcgct
gatcaatacaatgttagcgttgatagcattcgccaagccaaccagctacgcactgaccaa
ttgttggttgggcagcaactgattatcccgaataaataa
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