Vibrio cholerae O1 MJ-1236: VCD_001384
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Entry
VCD_001384 CDS
T00903
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00540
Lipopolysaccharide biosynthesis
vcj01100
Metabolic pathways
Module
vcj_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VCD_001384
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcj01005
]
VCD_001384
Enzymes [BR:
vcj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VCD_001384
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VCD_001384
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VCD_001384
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VCD_001384
Lipopolysaccharide biosynthesis proteins [BR:
vcj01005
]
Lipid A
VCD_001384
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
TPR_Nup160_C
Glyco_trans_1_2
Epimerase_2
DUF5313
Motif
Other DBs
NCBI-ProteinID:
ACQ59553
LinkDB
All DBs
Position
1:400417..401697
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AA seq
426 aa
AA seq
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MLLRTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLKTTTPPIWIHAASV
GETLAVTPLIKQIKQRSPNTPILLTTTTPTGAEQAEKLADWVEHRYTPIDFSFAVRGFLR
RVRPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLSL
VLCQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRTALGKHRPVWIAAS
THQGEDEIVLAAHQEILKQHPNALLILVPRHPERFAAVHKLAASLFSVQTRSSQQTITSD
TQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFTDI
THALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGALENTLTELGF
TKEFAQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccgtacgctttatacgcttttactcactttagctgcaccgtttttactgtat
ggcctctatcgccgtagacaggggaaacccagtgtcggaaaacgttggaaagagcatttc
ggcattaccccaccactaaaaaccacaaccccaccgatctggatccatgccgcgtcggtg
ggtgaaaccctagcggtaacgccactcataaaacaaattaagcaacgttcaccgaataca
ccaattctgctgactaccacgaccccgacgggtgctgaacaagcggaaaaattggcggat
tgggttgagcatcgttataccccgattgatttttcctttgcggtgagaggctttttgcgt
cgtgtacgaccttgccaattgatcatagtggaaacagaactgtggccaaatactctgcat
accgttgccaaagcgggtttgccgattacactcgtgaatgcacgactttcggaaaaatcc
tatcgcggctatcagcgtattcacccgttctttaacagtatggcgaaacctctcagccta
gtgttatgtcaatttgcagacgatgcgcagcgttttattcagctcggtgtggctgagaca
aaaatcaaaattaccggttcgattaagtttgatatcaacatcacctatgaggtgattgct
caaggtgaagcgctcagaacggctttaggtaaacatcgtccagtctggatagccgccagc
acacatcaaggtgaagatgaaattgtgcttgcggcacatcaagaaatcctcaagcagcat
cctaatgctttgttgattttagtgccgcgccatcctgaacgttttgcggcggtgcataag
ctcgcagctagccttttttcagtgcaaactcgtagcagccaacaaaccataacctccgac
actcaagtgtatctcggcgataccatgggagagatgctggtcttgctcggcgcttctgat
gtgtgttttatgggtggcagtttagtgggcaaaaaagtcggcgggcataatttgcttgaa
cctgctgcactggcaaaacccatcgttacaggccctagcttttacaactttaccgatatc
acccacgcactcatcaatgcacatgcctgtgtgattgctgaccaaccagaaaccattgcc
aagcaggtgaaccattggttttctgatgctcaagaacggcagcaatgcggaaaaaatgcc
ttagcgattgtaatgcaaaatcgtggagctctcgaaaataccttgaccgaattaggtttt
actaaggaattcgcccaatga
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