Vibrio cholerae O1 MJ-1236: VCD_001473
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Entry
VCD_001473 CDS
T00903
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcj03016
]
VCD_001473
Transfer RNA biogenesis [BR:
vcj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VCD_001473
Prokaryotic type
Methyltransferases
VCD_001473
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
ABC_tran
AIG1
Ras
Roc
Gtr1_RagA
SRPRB
Arf
AAA_28
AAA_29
DUF4702
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACQ59642
LinkDB
All DBs
Position
1:complement(511146..512507)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQ
GIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKM
DLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEI
DFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKES
AIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLF
MVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKT
GQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEILAE
ELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagataccattgtcgcgcaagctacggcacccggccgtggtggtgtcggcatt
attcgtgtatcaggcccactggctgcccacgtcgcgcagacagtcactggacgcacgctc
agaccccgctatgccgaatacttgcctttcaccgatgaagatggccaacagctcgatcaa
ggcattgcgctgtttttccccaatcctcattcatttaccggtgaagatgtgcttgagctg
caaggtcacggtggcccggtcgtcatggatatgctgatccgccgtattttgcagattaaa
ggagtgcgcccagcccgtcccggtgaattctcagaacgcgctttcctcaatgacaagatg
gatttaacccaagcggaagccatcgcagacctgattgatgccagctctgagcaagccgcg
aaatccgcgctgcaatcactgcaaggcgagttttctaaacgcatccataccttggtggaa
tcgctgattcacctgcgcatctatgttgaagccgcaattgatttcccagaagaagagatc
gattttctggccgatggtaaggtttccgctgatctgcaaaccatcatagataatcttgcc
gcagtgcgccgtgaagccaaccaaggcgccattatgcgcgaagggatgaaggtggtgatt
gctgggcgtcctaatgcgggtaaatcgagcctactcaatgcgctttcaggtaaagagtct
gccatcgttaccgacattgccggtaccacccgtgatgttctgcgtgagcatatccatatt
gatgggatgccgctgcacatcatcgatactgcgggactacgagacgcttctgatgcggta
gaaaaaattggtattgagcgcgcatgggaagagatccgccaagccgatcgcgtactgttt
atggtcgatggcaccaccacagaggccaccgatccacaggacatctggcctgattttgtt
gacaaactgccagagaatattgggatcactgtgatccgtaataaagccgatcaaactggt
gagccccttgggatctgccatgttaatcaacccaccttgatccgcctatcagccaaaaca
ggccaaggggtcgatgccttgcgtcagcacctcaaagagtgcatgggtttttcaggcaat
caggaaggtggctttatggcacgccgccgtcatctcgatgccctagagcgagccgcagag
cacttagcgattggccagcaacaacttgaaggctatatggccggagaaatcctcgccgaa
gagctgcgtatagcccagcaacaccttaacgaaattacgggcgagttcagctccgatgat
ctgcttggccgcattttttcatcattctgtatcgggaaatag
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