Vibrio cholerae O1 MJ-1236: VCD_001482
Help
Entry
VCD_001482 CDS
T00903
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VCD_001482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcj03400
]
VCD_001482
DNA repair and recombination proteins [BR:
vcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VCD_001482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_27
AAA_29
ABC_tran
SHE3
AAA_16
DUF2813
cobW
AAA_13
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACQ59651
LinkDB
All DBs
Position
1:520321..521412
Genome browser
AA seq
363 aa
AA seq
DB search
MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI
IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ
LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS
YWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILE
KNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGK
QCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFHVAHGVI
EQG
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttcccggttaatgatccaacagtttcgtaatattaaagcctgtgatattcgc
ctatcagcaggctttaactttcttatcgggccgaatggcagcggtaaaaccagcgtgctt
gaagcgatttatctgctcggccatggccgttcatttaaaagctcgctgaccggacggatc
attcaaaatgagtgctcagaactgtttgtgcatggccggatttgtgagcattctttgagc
tctgatcaatttgagctacccgttggcattaataagcagcgtgacggctcaactgaggtt
aaaataggcggccaaacagggcaaaaattggcgcaattagcgcagattttgccactgcaa
ttgattcatccggaaggctttgaactgctgaccgatggaccgaaacagcgtcgggctttt
atcgattggggcgtgtttcatactgagcccgcttttttcgatgcatgggggcggtttaag
cggctcagcaagcagcgtaatgcactgctaaaaagcgcgcaaagctatcgtgaactcagt
tattgggatcaagaattagcccgtttggctgagcagattgaccagtggcgtgaaagttac
gtcaatcaattgaaaaatgtggcagagcagttatgtcgcacatttttgccagaattcgat
atcgacttaaagtattatcgaggttgggaaaaagatcagccttatcaatcgattctggaa
aaaaacttcgaacgggatcagcagttgggctatacctttagcgggcctaacaaagcggat
ttgcggattaaagtgaacgcaaccccggtggaagatgtgttgtcgcggggacaactgaag
ttgatggtgtgtgcgttgcgcgtggcgcaagggcagcacctgaccgagttgacgggaaag
caatgcatttatcttatcgatgattttgcttccgaattggatagcctacgtcgccaacgt
ttggcagatagcctaaaagggacgggggcgcaggtttttgtaagttctattaccgaaagc
caagtggcggacatgttagatgagtccagtaaaacatttcacgttgcccacggtgtaata
gagcaaggataa
DBGET
integrated database retrieval system
