Vibrio cholerae O1 MJ-1236: VCD_001529
Help
Entry
VCD_001529 CDS
T00903
Name
(GenBank) thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00730
Thiamine metabolism
vcj01100
Metabolic pathways
vcj01240
Biosynthesis of cofactors
Module
vcj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VCD_001529
Enzymes [BR:
vcj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VCD_001529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACQ59698
LinkDB
All DBs
Position
1:570319..572256
Genome browser
AA seq
645 aa
AA seq
DB search
MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPI
FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD
ETLDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ
HAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAW
EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQ
TLDTTVIDLVMPAESIQLAMQDKSREFLASGAELYHPLVKEPIEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgtaaacaagcaagactggaagccaagcgctttattgataccctttctgtt
gaaccctatcctaactctcaaaaatcttacctattaggctctcgccctgatattcgggtg
cctgtcagagaaattactctcagcgatactttggtcggtggcagtaaagatgcacccatc
tttgagcccaatgagcctatctgtgtgtatgacacatctggcgtctatactgacccttca
catgatattgatctctacaaggggcttcctaagctcagagaggagtggattgaagagcgt
cgagatacgcacattctgcctagtatgagctctcatttcgcccgtgaacgcttagcggat
gaaactctagatgaactgcgttatggccatttaccgcgaattcgccgagcgatgggccag
catcgagtcactcagttacattacgcacggcagggaatcattacgccggaaatggagttt
gtggcgatccgtgaaaactctcgtcgtcttgctcatcaagatccaagtctacttcagcag
catgctgggcagaattttggtgctcatttacccgatctgattactcctgagtttgtgcgt
cgtgagattgcagaagggcgcgccatcatcccatgcaatattaatcatcctgaatctgaa
cccatgattattggccgcaatttcttggttaaggtgaatgccaatatcggtaactcttct
gttagctcttctattgaagaagaagtcgagaagttagtttgggcgacccgctggggcgca
gatactgtgatggatctgtcgacagggcgaaatatccatgaaacccgcgagtggatctta
cgtaatagccccgtgccaattggtactgtacctatgtatcaggcgctggaaaaagtgaat
ggtgtagcagaaaacctcacatgggaagtgatgcgcgataccttactagagcaagctgag
caaggtgtggactattttacaattcatgcgggcttgctattgcgttatgtgccgatgaca
gccaagcgcgtaacgggcatcgtttctcgtggcggctcgattattgcgaaatggtgtctt
tctcaccatcaagagaatttcctttatacccattttcgcgaaatctgtgagatttgtgcg
caatatgatgtggctctatctctaggggatggacttcgtcctggctcgattgctgatgct
aacgatgaagcgcaatttgctgagttacgtacccttggtgagctaacccaaatagcttgg
gaatatgatgtgcaggtcatgattgaagggccgggtcatgtacctatgcacttaattaaa
gccaatatggatgagcagcttaagcattgtcatgaggcgccattctatacccttggtcca
ttaactaccgatattgccccgggttatgatcacattacctccggtatcggtgcggccatg
attggttggtttggctgcgccatgctctgctatgtcacacctaaagaacatttggggctg
ccaaacaaagaagatgtcaaaacaggattgattacttataagttagcggctcatgcagca
gatttggcgaaagggcatccgggagcgcaaattcgtgataatgcattatcaaaagcacgt
tttgagtttcgttgggaagaccagttcaatcttgcgcttgatcccgtcacagcacgcgct
ttccatgatgagaccctaccgcaggaatcgggcaaagtcgcgcacttttgctctatgtgt
ggccccaaattctgctcgatgaagatctcgcaagaggtcagggattacgcaaataaccag
acattagacaccaccgtcattgacttggttatgcctgcagaatctatacagctggcgatg
caagataagtctcgtgagtttttagcctcaggtgctgaactctatcatcctttggtgaaa
gagccgatcgaggagtaa
DBGET
integrated database retrieval system
