Vibrio cholerae O1 MJ-1236: VCD_001557
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Entry
VCD_001557 CDS
T00903
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_001557
Transporters [BR:
vcj02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
VCD_001557
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GFIT
Motif
Pfam:
MatE
YmfE
Cad
Motif
Other DBs
NCBI-ProteinID:
ACQ59726
LinkDB
All DBs
Position
1:complement(598012..599376)
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AA seq
454 aa
AA seq
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MFCVSLILQTLKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALG
STMISVTFWLLGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVA
ELIFHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLT
NIVLDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKE
LSRLVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYA
MEAMVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATA
EHYLPWLVAMPLIAVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALW
LAMLSFMALRGFTLGATFYTQWRAGTFLPARFSI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgttctgtgtgtcactgattttgcaaacgttgaaacaaccgaatgtgcatcgccaagtg
ctggcgatcgcgctgcctatggtcctgtctaacattaccgttccactgctcggcttggtc
gatgctgcggtgatcggtcatctcgaacacgcttggtatttaggcggcgtggcactcggc
agcactatgattagcgtgacattctggctgctcggttttttacgcatgtcgaccacaggc
ttaaccgcccaagcgcacggtgcgcaaaattcacagcagcttgctcgagttttactgcaa
ggcagcgtcattgcactgggtttagccgcactgtttttactgtttcaccgccctgtcgcc
gaactgatttttcacttcagcgatgccagcagcgaagtcaaaacctacgctgaagcctat
ttctacattcgtgcttggagtgccccagccgccttgcttaactttgtactgcttggctgg
ttactcggcacccaaaatgcccgcgctccgatgtggatggtgatcatcaccaacctcacc
aatattgtgctcgatctgctgttggtactcgggcttgggctgaaagtcgaaggagccgcc
attgcgtcggttatcgccgattatgctggtctcttgtttggtctcctgtgcgtggggcgt
tactggcggcagcatcagctcccagcccctttctctttcatcccctctctcaccaaagag
ctttcccgtttagtggcgctcaatcgtgacatcttcctacgctcactctgtctgcaagcc
gtatttagctttatgacctttcaaggcgcagcgttgggagatgacatcgtcgctgctaat
gcggtgttgatgagctttttgatgatgatttcctacggtatggatggatttgcctacgcg
atggaagccatggttggtaaagcaattggtgccaaggatgatcgccaactgcgtactgcc
atgattagcagtaccttttgggctaccatgatctgtttgctgttaagcctgatcttctta
ggttttggatcggatctgatccaaatgatcactaacattccgagcgttcaagcaacggcg
gaacattatctgccttggctggtcgccatgccattaatcgccgtgtggtgttttctattg
gatggtgtgtttatcggcgcgaccaaaggcaaagagatgcgaaatagcatggctgtttcg
gccgtagcgttctttgccatttacgggttcatgacacactacggtaatcacgctctgtgg
ctagccatgctcagctttatggcactgcgtggttttaccttaggggctaccttttatact
caatggcgcgcggggacttttttaccggctcgcttttccatttaa
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