Vibrio cholerae O1 MJ-1236: VCD_001815
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Entry
VCD_001815 CDS
T00903
Name
(GenBank) uncharacterized protein YtfN
KO
K09800
translocation and assembly module TamB
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_001815
Transporters [BR:
vcj02000
]
Other transporters
Pores ion channels [TC:
1
]
VCD_001815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
ACQ59984
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All DBs
Position
1:863870..867634
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AA seq
1254 aa
AA seq
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MIKRALKWTKWLSMSLLVLVILLVLALAGALFTNPGLHVVLWGAQQALPQLKVEQAQGAL
FPRFTLQGVNYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDLPSLAESE
PAPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQT
EWQGIRLALAESEASTEPEAAQAATSDSAEPLQLPDVMIPLHIELARFDIRDFRLEQETP
IIVNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQVHLADFKG
QTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQVKAQWPMLGEGDY
HVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVALQSLKVDTLGGLVT
GNAVANWKNPLNWAARLNLKNIQPGLQWPEAEGKISGELDTSGALTEQGGWQVEVSRLAI
KGVLRDYPLKMLGELSASDVQGQGDITLQTKGVSLVHGPNSLTAKGQLSKQWRMSVELDV
PDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLDADSLQWQELGSIGHVTLQGNLVPLPE
PQGELTLQVRAIQYQDQRIDTVDLKAQGSQRKHEVTLDVTSDLASTSLAMNGRLRTEPTL
RWQGELERMWLNSPQGQWLLQQATALSFDQRTERVTVAAHCWVQGEASLCLEEEAELGAR
GETRLAIKQFDFKQLAGVLPKETKLSGGLNGQVWAKWAPKAAPQLQANLELTQGQVTQKL
NKSVTFGWDKAQFSAQLAKNQLQASWLLDATDNGDLSGNIQIADVRAEQKTMLGSLNLTT
FNLDFLQPLIGELSEAKSNINADVQFHGPMLHPQLNGEIAINDIRVKGEISPVDVQSGQV
SLKFNGYQAVLNADIQTTDGLLEVDGDADWQQIEDWRLKARVHAPSMMVELPPMVRVKVI
PDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVSKDQILLNADFEPLTDKERIPFS
VESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKDKGPFILGEVNIRNGQYRSFGQDLQIK
EGKILMNGPVDQPYLAITAIRNPNNTQDGVVAGVRVSGPSDEPSLTIFSEPAMPQANALS
YLLRGQNIDGEAGGNAMTTTLIGLSLAQSGKLVGEIGQAFGVQDLQLDTAGSGDDSQVTV
SGYILPGLQVKYGVGIFNSVGEFTVRYRLMQDLYLEAVSGVDSAVDLLYQFEFN
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgggcgttaaagtggaccaaatggctctctatgtcgctgttggtgttagtg
atcttgctggtgctggctttggcgggggcgctgtttaccaaccccggtttgcatgtggtt
ttgtggggcgcgcagcaagcattgccgcagttgaaagtggagcaagcgcagggcgcactg
tttccgcgttttactttgcaaggggtcaattatgcggatagtgagcttaatctgagcttt
tctgtgcaaaagctaagcttggcgattaaccccaactgcttattggaacccagtatctgt
atcaatgagctggcgctatctggagtcaagttagatctcccctcattagcagagagtgaa
ccggcacctgatgagcccgattctgagccgctgggagacatttccacgcccatcccgatt
cgcttaggtcagttagcgctacaagatattgaattaaatattctgggtaaccgagtggcg
tggcagcaattgaccacgcgagcgtcttggcaaggcaatcgcctgcgtatcgggcaaacc
gagtggcaggggatccgtcttgcgttagcggagagtgaagcctcaaccgaacctgaggcg
gctcaagcggccacctctgatagcgcagaacctttgcaactaccagacgtgatgatcccg
ctgcacattgagttagcgcgtttcgatattcgtgattttcgtttagaacaagagacgccg
atcatcgtcaatcatctagctttgcaagcgactgccgcgcagcacgacgtctctatctct
agtcttgagctgagcatgccggagctggatgcgcaattgaacgcacaagcgacgctcagt
caagattatcccattcagttagaactgcgcagtcaagtgcatcttgctgattttaaaggc
caaaccttatcactggccgcgcagggcagtcttgcggatctcactgtacaagccaatcta
gactcgttagctcaagcacagttgaacagccactttaatctgctggatgccgatataccg
tttgatctgcaactgagtcaggtgaaagcgcagtggcccatgttgggggaaggggattat
cacgttgaggttccggagttaagcattcagggctccttggccaagtatcagttcgccttg
cagggtgcgctacagggcaaagatttaccgaatgtgagtttagccctgcaagggcatggc
aatctggatgaagtcgcgttgcaatcacttaaagtcgatacgcttggcggcttagtgacg
ggcaatgctgtggcaaattggaaaaatccgctcaattgggccgctcggttaaacctgaaa
aatattcagcccggtctgcaatggcctgaagcagaaggcaagatcagtggtgagcttgat
acctctggcgctttgactgagcaaggtggctggcaagtggaggtttcacgcttagccatt
aaaggggtattacgtgattatccgcttaaaatgttaggcgaactcagcgcctccgatgtc
caaggacagggggatatcacgttacaaactaagggagtctccttagtgcatgggccgaac
tccctcaccgctaaaggccagttgagtaagcagtggcggatgtcggtggagttggatgta
ccggatttgagtaaatccctacccgatgcaaaaggcaaagtgattggcgatgtgctgctg
cgaggtgatctcaaacagccacgggtcaaattggtgctggatgccgatagcttgcaatgg
caagagttaggctcgattgggcatgtcactttgcaaggaaatctcgtgccactgcctgag
cctcaaggcgagctcaccttacaagtgcgcgctattcagtaccaagatcaacgaattgat
actgttgatttaaaagcacaaggctctcagagaaaacacgaggtgacactcgatgtcacc
tctgatctcgcttcgaccagcttggcgatgaatggccgattgcgtactgaacccacactg
cgctggcaaggtgagctggagcgcatgtggttaaattcaccgcaagggcaatggttatta
caacaggcgaccgctctctcctttgatcagcgaacggagcgcgttaccgtcgccgctcac
tgttgggtgcaaggggaggcttcgctctgtttagaagaagaggccgagttaggggcgcgg
ggtgagacgcgcttagcgattaagcagtttgattttaagcagctcgccggtgtcctgcct
aaggaaaccaaactcagtggcggcttgaatggccaagtgtgggctaagtgggctccgaaa
gcggcgccgcagttgcaagccaatcttgagttaacccaaggtcaggtgacgcaaaagctg
aataaaagcgtgacgtttggttgggataaagcgcaattttctgcccaattggcgaaaaat
cagctgcaagccagttggttattagatgcaaccgataatggtgatctctcgggcaatatc
caaattgccgatgtgcgtgcggagcagaaaaccatgctcggttcacttaacttaaccacg
tttaatctggatttcttgcaaccgttgattggtgaacttagtgaagcgaaatccaatatt
aatgccgatgtacaatttcatggcccgatgctgcatccgcaattgaacggtgaaattgcg
atcaatgatattcgcgtaaaaggtgagatctcgccggttgatgtgcaatccggtcaagtg
tcacttaaatttaatggttatcaggcagtgttaaatgctgatatccagaccaccgatggt
ttgctcgaagtcgatggtgatgccgattggcaacagatagaggattggcgactcaaagcg
cgagtgcatgctccctcaatgatggttgagctgccacctatggtgagagtcaaggtgatc
cctgatttaaccttgaccatgcaacctcaactggcacgcgtgacgggtaatatagcgctg
ccgtgggggcggattgtggtcgaagagttaccgccgagcgcgattggggtatcgaaagat
caaattttgctgaatgcggattttgagccactgactgacaaagagcggatcccgtttagt
gtggagagtgacgtcaatgtgcaaattggcgacgatttccaactcagtgcttttggtcta
caaggtaacttagtcggacgtctcaatgtggcgcaaaaggataaagggccgtttattttg
ggtgaggtgaacattcgcaatggtcaataccgctcatttggacaagatctgcagatcaaa
gaagggaagatcttgatgaatggcccggtggatcagccgtatttggcgatcactgcgatc
cgtaatcccaacaacacgcaagatggcgtggttgctggggtgcgagtcagtggaccctcg
gatgagccgtcactcaccatcttctctgaacctgcaatgccacaagccaatgcgctgtcg
tatttgttgcgtggacaaaatattgatggggaagcagggggcaacgccatgaccaccacc
ttgattggtctgagtttagcgcagagtggtaaactggttggcgagataggccaagcgttt
ggtgtgcaggatctgcaactggatacggcaggttctggagacgattcacaggtcacggtc
agtggttatattctgcccggcttgcaagtgaaatatggtgtaggtatttttaactcagtc
ggcgaatttactgtgcgttatcgcttgatgcaggatctgtatttggaggccgtctccggt
gtcgacagcgccgtagatctgctctatcagttcgaatttaactaa
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