Vibrio cholerae O1 MJ-1236: VCD_001872
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Entry
VCD_001872 CDS
T00903
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00061
Fatty acid biosynthesis
vcj00071
Fatty acid degradation
vcj01100
Metabolic pathways
vcj01212
Fatty acid metabolism
vcj02024
Quorum sensing
vcj04146
Peroxisome
Module
vcj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VCD_001872
00071 Fatty acid degradation
VCD_001872
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VCD_001872
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCD_001872
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcj01004
]
VCD_001872
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcj04147
]
VCD_001872
Enzymes [BR:
vcj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VCD_001872
Lipid biosynthesis proteins [BR:
vcj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VCD_001872
Exosome [BR:
vcj04147
]
Exosomal proteins
Exosomal proteins of breast milk
VCD_001872
Exosomal proteins of breast cancer cells
VCD_001872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACQ60041
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All DBs
Position
1:928695..930500
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AA seq
601 aa
AA seq
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MTNLDFHIVKRIRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQ
DKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFD
AALSQFEQCPELRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDL
FTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV
LYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWA
VNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGR
FFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVM
RGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGA
IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEK
RVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQDSPK
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttagatttccacatcgttaaacggatccgccaacgtattgcccaagggggt
gataacgccgcgctaaaacataaacaaaacggccaatggcaagcaatcaattggcaccag
tttggtgaacaattggatgaactctcgatggcgttgttagctcaaggcatcggtgtacag
gacaaaattgcgattttttccaacaacatgccacgttggacgattgctgattttgccgcc
ttacagatccgtgcggtaacggttcctatctatcctaccaatacgccagagcaggcggct
tacatcttacagaatgcggatgtgaaagtggtttttgtgggtgagcaggcacaatttgat
gctgcactcagccaatttgaacaatgcccagagctgcgtctgattgtggctatgaatgcc
aatatcgacctcaaacaagccagttgtgcgatgcattgggatgagtttgttgctcaaagt
caccatcaagatcgagcgccgttggatgccttaattgagcaggccaactatgacgatctg
tttaccctcatttatacctccggcactaccggaacgccgaaaggggtgatgctggattat
cgtaatatcggtgctcagctagagggacacgatcagcgcctgaatctgactcaagaggat
gtctcactctgtttcctgccactttctcatgtctttgagcgagcatggacggcgtatgtg
ctttataaaggtgcgaccaactgttacttgcaggacgtggctcatgtgcgtgaagcttta
gctgaagtccgtccaaccgtgatgtgtgccgtaccgcgcttttatgaaaagatcttctca
gcaatccatgaaaaagtcgttaaagcgccgttggtacgcaaggttctttttacttgggct
gtcaatatgggggcgaaaatggcggtgtgccgtcagcagcagcgccaaccttcttggatg
cttaaacagagccatcaattcgctgacaagctggtgttaagtaagctgcgcgctttgctt
gggggaagaatcaatttcatgccttgtggtggcgctaagttggatgaaaccattggccgc
tttttccatgcgattggtattaacgtcaagcttggttatggcatgaccgaaaccacggcc
acggtttcttgttgggatgaccactgttttaacccagattcgattgggctttctatgccg
ggagctcaagtcaaaattggcgagaacaatgaaattctggttcgtggtcctatggtgatg
cgtggctactacaagctcgataaagaaaccaccgaaagttttgatgagcagggttttctg
aaaacgggtgatgcgggtcatattgatgaaaatggtaatttatttattaccgatcgcatc
aaggaactgatgaaaacctcaggtggtaaatatattgcgccgcaggtgattgaaggggcg
attggtaaagatcatttcatagaacagatcgcggtgattgccgatacgcgcaagtttgtc
tcggctttgattgtgccttgctttgattcattggaagagtatgccaaagaactgaacatt
aaatatcatgaccgtctggagcttatcaaacatagccaagtactggagatgtttgaaaag
cgcgttaatgagttacaaaaagagctggcgaaatttgaacaagtgaagaagtttagattg
ttgccaaaagcattttcgatggacagtggtgagctgacaccgacccaaaaactgcgtcgt
aaagtgattaacgatcgctatcaggatgaaatcgaagaaatgtaccaagattctccgaaa
aaatag
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