KEGG   Vibrio cholerae O1 MJ-1236: VCD_001893
Entry
VCD_001893        CDS       T00903                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VCD_001893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcj03019]
    VCD_001893
   03009 Ribosome biogenesis [BR:vcj03009]
    VCD_001893
   03036 Chromosome and associated proteins [BR:vcj03036]
    VCD_001893
Enzymes [BR:vcj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     VCD_001893
Messenger RNA biogenesis [BR:vcj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VCD_001893
Ribosome biogenesis [BR:vcj03009]
 Eukaryotic type
  90S particles
   RNase
    VCD_001893
 Prokaryotic type
  rRNA processing factors
   VCD_001893
Chromosome and associated proteins [BR:vcj03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     VCD_001893
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: ACQ60062
LinkDB
Position
1:950497..951174
AA seq 225 aa
MTPPMNKLTSKLGYTFKETELLNLALTHRSANGKHNERLEFLGDSILSFVIADELYRRFP
KVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLETARSIVLEWYHGRLEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq 678 nt   +upstreamnt  +downstreamnt
atgacacctccaatgaataaattaacaagtaagctcggttatacctttaaggagactgag
ctgcttaatctggcgctgacacaccgcagcgccaatggtaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgagctctatcgccgcttcccg
aaagtgaatgagggagatatgagccgcatgcgtgccaccttagtgcgtggtaacacgttg
gcggagctgggtcgtgaattcgatctgggagattacttaaaattaggtccaggtgagttg
aaaagtggtggttttcgccgagactcgattctagcggatgcggtggaagcgatcatcggt
gcgatctaccttgacagcgatctggaaacggcgcgcagcattgtgcttgagtggtatcac
ggtcgtctggaagagattaaaccgggcgcatcacaaaaagacccgaaaactcgcttacaa
gagtttttgcagggcagaagaaaaccgctgcccgtctacacagtgactaatattaaaggt
gaagcacacaaccaagagtttaccgttgcgtgtgaagtggcaggtatggatacgcctgtg
atcggtaaaggcaccagccgccgcaaggcagagcaagcggctgcagaaacggctctggag
caattgaccaatggctga

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