Vibrio cholerae O1 MJ-1236: VCD_002116
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Entry
VCD_002116 CDS
T00903
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcj03009
]
VCD_002116
Enzymes [BR:
vcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
VCD_002116
Ribosome biogenesis [BR:
vcj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VCD_002116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACQ60283
LinkDB
All DBs
Position
1:complement(1216785..1217771)
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AA seq
328 aa
AA seq
DB search
MSQPTEKRLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLR
SKERPIYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDI
VNKILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVLT
QGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEILAMCEDSSGT
EEASRVAQSGDTIKRATDAKLFDSREANKESKARRNPKTYHGKNAQEFRHAPNSKKAQRR
PSSPSSNTASGSKPTPRTGGTLSLRKSK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccgactgaaaaacgcctcaataaattcatcagtgagacgggctattgctca
cgccgtgaagccgacaagctgattgagcaagggcgagtaactctcaatggcctacagcca
gaagtcggaagcaaagtcaccgagcaagatgaagtctgtattgacggtaagcctctgcgt
agcaaagagcgtccaatttatattgctttaaacaaacccactggcattacttgtacgacg
gaacgtgatgttccgggaaatatcgttgatttcattggtcaccacaaacgtattttccca
ataggtcgtttagataagccgtctgatggcctgatttttctgaccaatgatggcgatatc
gtgaataagatcctgcgtgcgggaaataaccacgaaaaagagtacgtggttcgagttgat
aaacccattacgcctgaatttatccgtcaaatgtcttctggggtaaacatcctcgatacg
gtaactctgccctgcaaagtgactcaagagacgcaatattcatttcgtattgtgctgact
cagggactgaaccgccaaattcgtcgcatgtgtgaagccttgggatatgaagtgtttaaa
ctgcgacgcgtgcggatcatgaacatcacgctagatggcattccaaacggtaaatggcgt
tatttaagcgaagcggaagtgagcgagattctggctatgtgtgaagactccagcggtaca
gaagaagcctcacgagtcgcgcaaagtggtgacacgattaaacgtgcgaccgatgccaag
ctatttgatagccgtgaagccaacaaagaatccaaagcgcgccgtaaccccaaaacctac
catggtaaaaatgcacaagagtttcgccatgcgccaaattcgaaaaaagcgcagcgtcgt
ccgtctagcccatcatccaatacagcctcaggctcaaagccaacaccgcgcaccggtggc
actttaagcctcagaaaatcgaaataa
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