Vibrio cholerae O1 MJ-1236: VCD_002129
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Entry
VCD_002129 CDS
T00903
Name
(GenBank) non-ribosomal peptide synthetase modules siderophore biosynthesis
KO
K12237
nonribosomal peptide synthetase VibF
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
VCD_002129
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
vcj01008
]
VCD_002129
Polyketide biosynthesis proteins [BR:
vcj01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Vibriobactin synthetase
VCD_002129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
SidE_PDE
Motif
Other DBs
NCBI-ProteinID:
ACQ60296
LinkDB
All DBs
Position
1:1234009..1241262
Genome browser
AA seq
2417 aa
AA seq
DB search
MGLKMKEMTAMQAAYWLGRQHDCLLDGVAAHLYAEFDGQALNRQALTEAVRALYAKHPML
RLAITKDGQQKILPLSTFHQLKVDDLSQWKPDEVESFVHTKRQRMTHQMLDLTQGNPIEI
SLTLLPEGKHRLHIDADMIACDAQSFRLLVDDLTSLYLEAIEHRLEIIESDVVTFFQYLD
AQQADRALAKRKEVDKKWWQERLATIPAEPSLPYQPVPTDAVSANSQRFAHWFTPVERKG
LAEVARQHHLTLTQLTLALFSQVIANACQERQFRLNVPTFHRGNRSLDIEHTIGDFSNLL
IFSADVGTTQTLLSLCQQTANQLHQLLRHESYSGVSVMRDLSRKQGGVQRSPIVFTSGME
MRDEEIFSDHVTQHLGRMNWVISQGAQVTLDAQIAPAYEGILLNWDVRMENFADKDITAL
FAHYVDLIRCVALHPEMMQQSVQQIDAQLGYARRESIQEMPLTPLQQAYLLGRSTQIALG
GVAMHEFREYRGHIDTQSLHSRLLYLVEHIPALRTRIDQEKWIQWVSPCIALNWQAIDLQ
HLSREQALLAVEPVRQQYQQRMHDLTRSPWQICVVQLPIEEQEEFSSIVLTSFDALIVDG
RTHALILAALLGSEEPDITQVVQNARDTQSISPQFASKKAQDEAYWKSKLHPDCPPPALP
WKQALETITTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILDVLSYWTTEIGM
RVGFPVLIPSSNAIDGNESSFVILEHEKSTLSLLSQASKLQREMLEALEHLAFSGVDLNR
LLMNQAPQALVLPVVLTNGLSWKTLNPEDAVTLFDGVTQTPQVALDIRLTYDEQKNLIIS
FDYALAVLETELIREMLSALHHRLSQITSSASLAAPLEPCIDLSHYRFNSDESASHDCDF
LAKLAQQLFVRTEDKTAVICGEQTLSYAQLGEQVQRVMWQLKARGLTTGNVLAICLPRSV
EHIVISLASALSGIIWVPIDAASPKERLNYLLENCHADLVVMDKPCEFGNVIAFDALIEP
VLFADGVPDVTPLDQLSRLSQSQQTAYYLYTSGTTGKPKCVVVNNQATSNVIGQTGQAWH
LTSEDVVMSVTPLHHDMSVFDLFATLSFGATLVLPAGHEEKDALQWNRLIERHQVTIWVS
VPAILEMLLSCTQAGQLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISLGGPTETTIWS
IWHELTADDVSVIPYGRPLAGNRYFIMDEIQRHVPQGVVGRIFTSGVNLAQGYLEDGELK
QTDFVTVLDEHGHPVRAFRTGDQGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQT
HPALASVVVVDYADTNGDTALAALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEA
LPLSANGKVDRKQCQAHVQRQSISVEPVGQPNQSQPLSPPTLSSASLSEFEQRVWRQHQR
HGDGRNQYATAYRLSGKVNIARLITALSQLPNHFPVLNRRYVLDEASGLTLYSAKPTPLE
IHFEHVESMDEAFEHLVRWQNQPMDLAKQATLSFCLLSLGSEERVLGVISHQIISEQWDW
RRVFECVTNGYNQIACDIDPVMEGEDLSLGFTPVMPQTPLSQALLPWLQPASHATWIEQS
LPSANSAINTLCSRKYRIALHSSVLAEHGLAQPDKQEVLALIAALFARYLAASAKLGQFE
LYVPHDVERKTRELNGSMIESQLVHIALKGFERPLSQLSQEILDAMRQPLTGGVASETHA
SAAALVTWLVDPSVHLQLEGLRCEKLLFAAMHPKFEVALGVGLNCQGALVLELALDATVS
PHVGAYLLEQFVAAIGGRTMPSSTTSSSHVSAIELTSNNPPTSNNAHAALAESELELSAV
NSSAVEECILAEFRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLLSEQGIELHINDMFS
FPNAKQLAQQAVLHRKPTSTSFAVSEVVESSKAPLSLAQASLWKAMSKYAKFGLTHIFNL
PFALKFLDEVNEQAFGEAFHWLLLRHAGLRTHFGLEDGQPYQHVIAASNIEHYQWFWTSK
DNAAQSVARLLAQEAEHTFDLSQELPLRLNFVRDEQTGTQYLSLLFHHIVLDEWSINILM
DELAQVYQHSVQGTRPQWQTEPLPFHEFARKQRSSAFNQTHLNYWLTKFAGVPWAQPLFA
ADHPLSNSTGVDLGEGGWVEIKLPKSTMVSLYQLAKARHASLFNVMYAAISASVHCLGAP
EKLLVGTPASGRLDAEFFDTVGYFTTMGVQLVDFTKVQTVWQLIEQVKNSINQSMPYTDI
PIDLIEEGLKGVEHETEGHMFEVFIQLHAKNKLHGELLLTEGHAIRFQQVDPDKSESGLG
LQFEILEERIEQKQTLRVMMSYMSKHYSPAQVALLTKVTSGMFERFSDCIAQDIALPTLK
KQVRQLEDEACRSPSMG
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttaaagatgaaagaaatgacagcaatgcaagcggcttattggctagggcgtcaa
cacgactgcttgctcgatggtgtggccgcgcatctctacgccgaatttgatggtcaagca
ttaaatcgacaggcgctaacggaagcggtacgtgcgctgtacgcgaaacatcccatgtta
cgtttagcgatcaccaaggatggacagcagaagatcttgccgctctcaactttccatcag
cttaaagtggatgacctatcacaatggaagccagatgaggtggagtcttttgtgcatact
aagcgccagcgaatgacccaccagatgctcgatttaactcagggaaacccgattgagatc
agcttgactctgttgcctgagggcaaacaccgattacacattgatgcggatatgattgcg
tgtgatgcacaaagttttcggctgttggtggacgatctcacctcactctatttagaggcc
atagagcatcgattagagatcattgagtctgatgtggtgacttttttccaatatcttgat
gctcagcaagccgatcgtgctttggcaaaacgcaaagaggtggataagaaatggtggcaa
gagcgtcttgcgacgattcccgccgagccaagtttgccttatcaacccgtaccaaccgac
gccgttagcgcaaacagccaaaggtttgcacactggttcactccagtggagcgcaaaggg
ttggcggaggttgcgcggcaacatcatctcacactgacccaactgacattggcactcttt
tcacaagtgattgccaatgcttgccaagagagacaatttcgactcaatgtacctacattc
catcgcggcaatcgctctttggatattgaacacacgatcggcgatttttccaatttgctg
atttttagcgccgatgtgggaacgactcagaccctgttaagcctgtgtcagcaaacggct
aaccaactgcatcaattacttcgccatgaaagctattcaggggttagcgtgatgcgcgat
ttatcgcggaaacagggtggggtgcagcgttcaccgatagtctttacctcaggcatggaa
atgcgagacgaggagatcttttccgatcatgtcactcagcatttagggcgtatgaattgg
gtgatttcgcagggagcgcaggtgactctcgatgcgcaaattgctccggcttatgaaggg
attttgctcaattgggatgtgcgaatggaaaacttcgctgataaggacatcacagcgctt
ttcgcgcattacgttgatttgatccgctgtgtggcgctgcatcctgagatgatgcagcaa
agcgtacaacagattgacgcgcaactcggttatgctcgccgcgagtcgattcaggagatg
ccactgacccctttacaacaagcttacttgctaggtcgctcaacccaaattgccttaggc
ggcgtcgcgatgcatgagtttcgtgagtatcgaggtcacatcgacactcagtcactgcat
agccgtctgctctatctcgttgagcatattcctgccttgagaactcgcattgatcaagag
aaatggattcagtgggtctctccttgcatagcgttaaattggcaagccatcgatttacag
catctttcccgcgaacaagccttattagcggttgagccagtcaggcagcaatatcagcag
cggatgcatgatttaacgcgctcgccctggcaaatctgtgtggtgcaactgccaatagaa
gagcaagaggagttcagctccatcgtattgaccagctttgatgctttgattgtcgatggt
cgcacccatgcactcattcttgctgcactactaggaagcgaagaacccgatataactcag
gtggtgcaaaatgctcgtgatactcagtccatctcgccgcaattcgcctccaaaaaagcg
caagatgaagcgtattggaaaagcaaacttcatcctgattgcccgccgccagcactgcct
tggaaacaagcattagagacgatcactacgtctcgttatgctcgtgaaagtttgcaaata
cccaaagagagtgtcggtaagctcaatcgatgcggcattgaaaatggcttatttctcaat
tccttgctgacagcaaccatcttggacgtgctctcctattggacaaccgaaatcgggatg
cgagtgggttttccggtattaattccaagcagtaatgcgattgatggcaatgagtcatcc
tttgtgatcttagagcatgaaaaatccaccctgagtttgctgagccaagcgagcaagcta
cagcgtgagatgctagaggctcttgagcatcttgctttttctggcgtcgatcttaaccgt
ctgttgatgaatcaagcgccgcaagctctggtgctgccggttgtgttaaccaatggtttg
tcttggaaaaccctgaatccagaggacgctgtcactctgttcgatggggtaacgcaaact
ccgcaggtggctttagatattcgcttaacttacgacgagcagaaaaacctcatcatcagc
tttgattatgctttagcggttttagagactgagcttatccgcgagatgttaagtgcctta
catcatcgcttgagtcagatcacttcgtcagcatcattggccgcgccgcttgagccatgt
atcgacctttcacactaccgttttaatagcgatgagtcggccagtcacgattgcgatttt
cttgccaagttagcgcagcaattgtttgtccgcacagaggataaaaccgctgtgatctgc
ggtgaacaaaccctttcttatgctcaattgggtgagcaggttcagcgcgtgatgtggcag
ctcaaagcgcgagggttgaccacaggaaatgtgctcgccatttgcttgccacgcagtgtt
gaacatatcgtcatcagtttggcttctgcactttcggggattatctgggtacctattgat
gctgcgtctcccaaagagcgtctgaattaccttttagaaaattgtcacgccgatctggtg
gtgatggataagccctgtgagtttggcaatgtgatcgcttttgatgccttgattgagcct
gtcttattcgccgatggagtacctgacgttacaccactcgatcaattaagccgattaagc
caaagccaacaaacggcttattatctttatacctctggcactacgggcaaacctaagtgc
gtggtggtcaataatcaggcgacctcgaatgtgattggtcaaactggccaagcgtggcat
ctcaccagtgaggatgtggtgatgtcagtgacgccattgcatcatgatatgtcggtgttt
gatctctttgccaccttgagcttcggagcgacgttagttcttcccgctgggcatgaagaa
aaagatgcgttgcaatggaatcgcttaattgagcggcatcaagtgacgatttgggtctcc
gtccccgctatcttggagatgttgctctcttgcactcaagcagggcaattacactcactt
cgtctgattgcccaagggggggattacatcaaacctgccaccatcgcccaattacgcgct
ggttcaaatccgccgcggttgatctctttgggcggtcctaccgagacgacgatttggagc
atctggcatgagctgacggcagatgatgtcagcgtgatcccatatggtcggccgttggcg
ggaaaccgttatttcattatggatgagatacaacgccatgtaccgcaaggtgtggtcggc
cgtatcttcacctctggggtcaatttagcgcaaggttatcttgaagacggcgaactgaaa
caaaccgattttgtcaccgtattggatgagcatggccaccctgtgcgcgcgtttcgaacg
ggcgatcaaggctactaccgcgcggacggcaatatcatttttgctagccgcatcaatggt
tatgtgaaagttcgtggggtacgagtgtcactgccggatatcgaaaagcagctgcaaact
catccggcgctcgcgagcgtggtggtggtcgattatgcggatactaatggagataccgct
ttagccgcattatttagcgttaaacctcagcaatcagcatcgagtcaggcgttacgagag
tttgccaaacaatcgctaccgtcttcgcatattccgagtcggtttattgctttagaggct
ttaccgctttctgcgaatggtaaagtggatcgcaaacagtgccaagcgcatgttcagcga
caatcgatctctgttgaaccagtaggtcaaccgaatcaaagtcaacctctctcaccacct
accttgtcatcggcttccttgagtgagtttgaacagcgagtctggcgacagcatcaacga
catggtgacggacgcaatcaatatgcgaccgcttatcgattgagcggaaaagtgaatatc
gcgcgcttaatcacagcgctcagtcagttgcccaatcattttccagtgttaaaccgacgc
tatgtgcttgatgaggcatccggcttaaccttgtactcggcgaagccaacaccgcttgag
atccattttgagcatgttgagtcaatggatgaggcgtttgaacatcttgtgcgatggcaa
aatcagccgatggatttagccaagcaagccacactaagtttttgcttgttgagtttgggg
agcgaagagcgagtgcttggggtgataagccatcaaattatcagcgagcaatgggattgg
cggcgcgtatttgagtgcgtaaccaatgggtataaccaaatcgcctgtgacatcgatcct
gtgatggagggggaggatctttccctcggctttacccctgtgatgccgcaaacgccatta
tcccaagcgttgttgccgtggttacagcctgcgagccacgctacatggattgagcagagc
ttgccgagcgcaaatagcgccatcaatacgctttgcagtcgtaaatatcggattgcccta
cacagcagcgtactggcggagcatggtttagcgcagccggataagcaggaagtgcttgca
ctgatcgccgcgttatttgctcgctaccttgccgcaagtgcgaaacttggccaatttgag
ctttacgttccgcatgatgtggagcgcaaaacgcgtgagttgaatggttctatgattgaa
agccagttggtgcatatcgcccttaaaggctttgagcgtccgctttcgcaactgagccaa
gagatcttagacgctatgcgccagccgttaacggggggagtcgctagcgaaactcacgcc
tctgccgcagccttggtgacttggttagtggatccttcagtgcatctacaattggagggc
ttgcgctgcgaaaaattactttttgcagccatgcaccccaaatttgaagtcgccttgggg
gttgggcttaattgccaaggtgccctagtacttgagctggcgttagatgccacggtttcc
ccccatgtcggagcctacttgcttgagcaatttgtcgctgcgataggtgggcgaacaatg
ccttcttcgacaacctcatcctctcatgtctcagccattgagttgacgtcaaacaatccg
ccgacctcaaacaatgcgcatgcggcgttggcagagtctgagcttgaattgagcgctgta
aattcctctgcggttgaagagtgcattttggctgagtttcgctcagcacttggtgttgcc
gagatgacggcagaggatgatttctttgattttggcggacattccctgatcgcaacgcga
gtcattggtcgcttgttgagcgagcaaggtattgaactgcacatcaatgatatgtttagt
ttccctaatgccaagcaactggcgcagcaagccgtacttcaccgtaaacccaccagcaca
tcattcgcagtgagtgaggtggtcgagtcgtccaaagcgcctttgtcgttagcacaagcc
tctttatggaaggcgatgagcaaatacgccaagtttggtttgacccacatcttcaatctt
ccgtttgcgcttaaatttttagatgaggtcaatgagcaagcatttggtgaggcttttcac
tggcttttactgcgtcatgctgggttacgaacccactttggcctagaagatgggcagcct
taccagcacgtgatcgcagccagcaacatagaacattaccagtggttctggacgtctaaa
gataacgccgcccaatccgtggccagactactggcgcaagaggccgagcacacctttgac
ctgagccaagaattgccacttcgactcaatttcgtacgtgatgaacagacggggacgcaa
tatctttcacttctgttccaccatattgtgttggatgagtggtcgatcaatattttgatg
gatgaattagcacaggtgtatcaacacagtgtgcaaggtactcgtccacagtggcaaacg
gaacccttacctttccatgagtttgctcgcaagcagcgttcttcggcattcaatcaaacg
catcttaactattggttaaccaagtttgccggtgtgccttgggcacagcctctgtttgct
gcggatcatcctttaagtaacagcactggcgtcgatcttggagaaggcggctgggtcgaa
ataaaattgccgaaatcaaccatggtatcgctgtatcaattggctaaagcacgccatgct
tcgttgtttaacgtgatgtatgcggcgatttctgcgtcggtacattgtctcggcgcacca
gaaaagctgctggttggcacacctgcttccggtcggctggatgccgagtttttcgacaca
gtcggttatttcactaccatgggcgttcagttggtggatttcacgaaagtacaaacggtg
tggcaactcatcgagcaagtgaaaaacagcattaaccagtcgatgccatacacagatatt
ccgattgacctgattgaagaagggctcaaaggtgttgagcatgagacggaaggtcacatg
tttgaggtctttatacaactgcatgcaaaaaataagctgcatggagagctactgttgaca
gaagggcatgcgatccgcttccaacaagtcgatcccgataaaagtgaatccggcttaggt
ttacagtttgaaattttagaagagaggatcgagcaaaagcagacgttgagagtcatgatg
agttatatgtcgaaacactatagcccagctcaagtcgctctgttgaccaaggtaaccagt
ggcatgtttgagcggttttccgattgtattgcacaagatattgcactgccgacgctgaaa
aagcaggtgaggcagcttgaagatgaagcttgtcgctctccgtccatggggtag
DBGET
integrated database retrieval system
