Vibrio cholerae O1 MJ-1236: VCD_002259
Help
Entry
VCD_002259 CDS
T00903
Name
(GenBank) 5-methylaminomethyl-2-thiouridine-forming enzyme MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcj03016
]
VCD_002259
Enzymes [BR:
vcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
VCD_002259
Transfer RNA biogenesis [BR:
vcj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VCD_002259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_3
Pyr_redox_2
FAD_binding_2
FAD_binding_3
3HCDH_N
Glyco_transf_4
Pyr_redox
GIDA
Motif
Other DBs
NCBI-ProteinID:
ACQ60426
LinkDB
All DBs
Position
1:complement(1358270..1360285)
Genome browser
AA seq
671 aa
AA seq
DB search
MSSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVI
AETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQ
FAQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAP
SKNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAG
SLSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQ
GASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEK
ATDKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQGLIHLL
EQQGKLTAHYQTPIDALTWQPETQLWQLRSGDTLMSHQCVVIASGHQFDSLSQTAELPLG
KVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQHE
NAQKLIHCLPEQTWPLEVDVSGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLAQQH
QAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVRK
LRKGKALTQKV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatttcacacgcccagcttggctggaacgacgcaggaacccccgtctctgat
caatttgacgatgtttatttctctaacgtcaatggtctggctgagacgcgctatgtgttc
cttgagcagaatcatctcccacaaagatggcacaacgatgaccaaagacgatttgtgatt
gcagaaactggcttcggtactggcctgaattttctggcggtgtggcaagcgtttgtcgcg
tttcgtgaagccaatcccgatgccaaactcaaagagctgcatttcatcagttttgaaaaa
tacccgctcagtaaaagcgatttaattcaagcgcatcaagcgtggccggaactggcgcaa
ttcgcgcaaaaactgcacaagcactacccgttagccattccagagtgtcagcggattgtg
ttgaatgatggactcgtcacgctcgatctctggtttggggatatcaaagactgcctgccg
aaagtcgcaacacaagagcaaggcttagtggatgcatggttcctcgatggttttgctccc
agcaaaaaccccgagatgtggaatcaaaacctgtttgcaggtatggcaaaactggcgaaa
catggctgtacctgcgccacctttacttcggctggctttgtccgccgcggcttgattgac
gcgggttttgcgatgaaaaaggtcaaaggctttggcactaagcgtgaaatgatcgccggc
agcctgagtgaaaaagtaccttacaccaatatcgcacccgaatttcgttttgaggccact
cacggcctacaagaggtggccatcatcggcggtggtatcgccagtgccacgctagcgaca
accttagccagacgcggtgttgccgtcacgctttactgcgccgatgagaaaccggcgcaa
ggtgcatccggtaaccgacaaggcgcggtctatccgctactcagtggcgatcacaacgcg
gtttcacgagtgtttgcgcctgcctttctgtttgcccgccaatggattgaacaagcggcg
gagcagataaactttgaccacgattggtgcggcgtgactcaattaatgtgggatgaaaaa
gccacggacaaactcaagagcatgcttgaggggaatttcccaacacaattagtgcatggt
ttatccgcagagcaaaccaatcaacaagtcggcgtgccagtggataaagccagtgtgcat
tatccgctcggaggctggctcagccctgcggagctgactcaaggcttaatccatctttta
gagcagcagggcaagctcactgcgcattatcagactccgattgatgcattgacttggcag
ccagagactcaactgtggcaactgcgcagtggcgacacactcatgtcacatcagtgtgtg
gtgattgccagtggccatcaatttgacagcctgtcacaaaccgcagagttaccacttggc
aaagtgaaaggccaagtgagccacatcccgaccacagagacgctgagcaaaatcaacagt
gtgctctgttacgacggttacatgactccggtcagccaacaaaatgggtatcactgtatt
ggcgcaagttatgatcgccagcaccttgatgcgacttttgatccgcaagcacaacacgaa
aatgcacaaaagctaattcactgcttgcctgagcaaacttggccattggaagtggatgtc
agcggcaatcaatcacgccaaggcgtgcgctgtgtgagtcgcgatcatctgccttttgtc
ggcaatgtcggcgaattttcgaaaatcaccgagcaatatcgcgatttagctcagcagcac
caagctgagccaatcgcgctctatccgcaactttatgcgttggtcgggcttggctcacgc
ggtttaagtagcgcgccgctgatggcagaacttcttgcttcgcaaatgtgtggcgacccc
atgccactaggcgtagatttgctcgaacagttacaccctagtcggatgtgggttcgaaag
ctgcgtaaaggcaaggcgctcacacaaaaagtctga
DBGET
integrated database retrieval system
