Vibrio cholerae O1 MJ-1236: VCD_002462
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Entry
VCD_002462 CDS
T00903
Name
(GenBank) transcriptional regulator for fatty acid degradation FadR GntR family
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcj03000
]
VCD_002462
Transcription factors [BR:
vcj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VCD_002462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FadR_C
GntR
TrmB
HTH_Crp_2
FCD
HTH_24
Rrf2
HTH_IclR
Fe_dep_repress
PaaX
SitI3
MarR_2
MarR
HVO_A0261_N
Cache_3-Cache_2
Motif
Other DBs
NCBI-ProteinID:
ACQ60628
LinkDB
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Position
1:1578873..1579712
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AA seq
279 aa
AA seq
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MVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
LTIQHGKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLN
KESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKT
FNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQLLAVC
QSGEREHLPQVIRQYGIASGHIWNQMKMTLPSNFTEDDC
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtcattaaggcaaaaagcccagccggtttcgctgagaagtatattattgaaagtatt
tggaacggccgctttccgccaggttccatcttacctgcagagcgtgagctttctgaattg
atcggtgttacgcgtaccacactacgtgaggtgttacagcgtttagcgcgtgatggttgg
ctcacgattcaacacggtaaacccaccaaggtgaatcagtttatggaaacatcaggtttg
catattcttgataccttgatgactcttgatgcagagaatgccaccagcattgttgaagac
ttactagctgcaagaaccaatatcagccccattttcatgcgttacgcttttaagctaaat
aaagagagcgcagagcggatcatgatcaatgtgattgagtcttgtgaagccttggttaac
gccccttcttgggatgcgtttatcgcagcttctccctatgcggaaaaaatccagcagcac
gtgaaagaagacagcgaaaaagatgagctcaaaaggcaggaaatcttgatcgcgaaaaca
tttaatttctacgattacatgttattccagcgtctcgctttccattctggtaaccagatt
tacggtttgatctttaacgggttgaaaaagctgtatgaccgtgtgggaagttactatttt
tccaatcctcaagcgcgtgaattggccatggaattctaccgtcagttgttagctgtgtgc
caaagcggcgagcgtgagcatttgcctcaggttattcgtcagtatggtattgctagcgga
cacatctggaatcagatgaaaatgacgctgccgtccaattttactgaagacgattgctaa
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