Vibrio cholerae O1 MJ-1236: VCD_002522
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Entry
VCD_002522 CDS
T00903
Name
(GenBank) outer membrane protein OmpT
KO
K10940
outer membrane protein OmpT
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_002522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_002522
Transporters [BR:
vcj02000
]
Other transporters
Pores ion channels [TC:
1
]
VCD_002522
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ACQ60688
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All DBs
Position
1:1653745..1654779
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AA seq
344 aa
AA seq
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MKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAGVD
ANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKTNFGKFSFGKQWTTSDDVYGADYSY
FFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGYGFPEDNAKQELAELYVGATFGDLA
VHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYFEVTGEYTIGDALIGVTYYNAELDV
ENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQEANTGADEDGTLVYLGVEYKFASWA
RVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNFGIGARIYW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctctgtaaacgcagct
gaaattctaaaatcagatgctggcacagttgatttttacggtcagctacgtacagaattg
aaattcttagaagataaagatccaacaattggttctggttcttcgcgcgctggtgttgat
gcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaattcgcactaaaa
gacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaactaattttggtaag
tttagctttggtaaacaatggactacatctgacgatgtatacggtgctgactactcttat
ttctttggtggtacaggtcttcgttacggcacactgtctgatgcactacacgattctcaa
gtcaagtatgtttacgaagctgacagcttctgggttaaagctggttacggttttccagaa
gataatgcaaagcaagagctagcagaactgtatgtaggtgcaacatttggtgatttggct
gtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggtagtaatacggtt
ggcacaacaaccacagatattaaagctgacgtaacaaatagttactttgaagtgacaggt
gagtacactattggtgatgcactgattggtgttacttactacaacgcagaactagatgta
gaaaataacccactagtgatcgatgaagacgctatttctgttgctggtacatacaaagtt
gctgacaagacaaaattgtatgctggctatgagtatgtaatgcaagaagcgaacactggc
gcagatgaagatggtactcttgtttacctaggtgttgaatacaaatttgcaagctgggct
cgtgtatatgctgagtatggctacggcgatggtacaactctgggttacaccaacaagggt
tctgacgcagaagttaaagcaacgaaagtcgacagcgctaataactttggtatcggtgct
cgtatctactggtaa
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