Vibrio cholerae O1 MJ-1236: VCD_002531
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Entry
VCD_002531 CDS
T00903
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VCD_002531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcj03400
]
VCD_002531
Enzymes [BR:
vcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VCD_002531
DNA repair and recombination proteins [BR:
vcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VCD_002531
RecFOR pathway proteins
VCD_002531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_14
AAA_3
AAA_22
nSTAND3
Rad17
TIP49
NTPase_1
AAA_18
RNA_helicase
DUF815
AAA_17
TniB
Bac_DnaA
Sigma54_activ_2
ABC_tran
AAA_24
NB-ARC
AAA_28
TsaE
bpMoxR
NPHP3_N
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACQ60697
LinkDB
All DBs
Position
1:1661607..1662611
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL
LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV
QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG
DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE
DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaattgctccaatcagcaaccacttcaaagatgaggaagtg
attgatcgagcgattcgtcccaaaaagcttgccgattaccaaggtcaagatcatgttcgt
gatcagatggaaatcttcattcaagcggcacaaatgcgccaagaagccttagatcatctg
ctgattttcgggcctccgggcttgggtaaaaccaccttggccaacatagtcgctaacgaa
atgggcgtgaatattcgtactacttcaggtcctgtattggaaaaagcgggagatttagcg
gcactgctaaccaatcttgaagaaaacgatgtgctgtttattgatgaaatccatcgtctg
agcccaatggttgaggaagtactgtatcccgctatggaagattaccaactcgatatcatg
attggtgaaggcccagctgcacgctcaatcaaaatcgatctccctccttttactttaatt
ggagccaccacacgtgcaggctcgctgacttcaccactgcgtgaccgatttgggattgtg
caacgattggagtattacaaagtcgccgatttacaacacatagtgcaacgtagtgcacag
tgtctcggtctttcgatggatagtgagggcgctcttgaagtggctcgccgtgcacgtgga
accccacggattgccaatcgcctgctgcgccgggtacgagattatgccgaagtaaaaggg
gatgggcacatttgtgcgcaaaccgctgacagggcactcaatatgcttgatgttgaccat
caaggctttgattacatggatagaaagctgctgttagcaataatggaaaagttttcaggt
ggcccagtcggaatcgataaccttgcggcagctattggcgaagagaaagatacgatagaa
gatgttcttgagccatttctcattcagcagggttatttacaacgtacaccacgcggtcgt
atcgcgacagatcgcgcttatttgcatttcggtattgaaaaataa
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