Vibrio cholerae O1 MJ-1236: VCD_002746
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Entry
VCD_002746 CDS
T00903
Name
(GenBank) ABC-type antimicrobial peptide transport system permease component
KO
K02004
putative ABC transport system permease protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_002746
Transporters [BR:
vcj02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
VCD_002746
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
DUF3285
DUF6026
Motif
Other DBs
NCBI-ProteinID:
ACQ60910
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Position
1:1912234..1914687
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AA seq
817 aa
AA seq
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MLWPVVKALLGHYRRYPLQICLVWLGLTLGVSLLVGVTAINHHARQSYEHGEKLFSNPLP
YRIRSKHIANKIPQGLYIQLRRDGFQQCVPFDDYRFSTTSGLDLILQGIDPVALLSIDNG
KPLAQQSGLQLMNPPYPVMVSQELAKLQDWQEGDYIALTDGSQLGPIVIDRHNQVTGMRV
VADLSLVRMLKKGSGLTVIACADMPPAKLDKLKKSLPNGLTLTRSTRSELESLTQAFHLN
LTAMGMLAFLVGIFIFYQAMSLSMVQRQPLVGTLRQIGVNGWQLAKALLIELLVLVLVSW
VCGNVLGLLLANQLIPSVASSLGYLYNANVDLAIGWDWSWSSYSLLMALLAAFASCTWPL
VRLLRSQPIRLSARLSLVRFAGKEFKLQALLACALCVAAVAIYQAPKSQQSGFAIIGLML
LSVALFTPYIIWTLFTSFSYTLRWVKVRWFFADAAASMSYRGVATMAFMVALAANIGVET
MVGSFRDTTDRWLSQRLAADIYLYPSNSVASRMSQWLGQQPEVDAVWWRWEKDFASQQGP
VQIVSTGASDGELDSLTVKLGVPNYWYHLHHARGVMISESMALKLGIRPGDLIDLPEPMG
SGWAVFGVYYDYGNPYHQVMMSHQNWMKAFAGTGNVALAVVLKEGLTGESVKKRLDTIFR
LDADRIFDNTNIHSHAMRVFDRTFSIAGTLGNITLFIAVCGIFFSTLAGETSRLRHISLL
RCLGVSGKELVLIGGMQLFVFGAISLLIALPLGLTLAKLVIDVVIKHSFGWTMQLQMVPG
EYVYTVVWSMMALILAGALPIIRLARKSPMKSLREAL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttatggcccgtagttaaggcgctattgggtcattatcgtcgctatccattacagatt
tgtctggtctggcttggcttgactctcggtgtctctctattggtgggcgttacagccatt
aaccatcatgccagacaaagttatgagcatggtgagaagctattttctaatcctttaccc
tatcgtattcgctccaagcatattgctaataaaattccgcaaggcttatatattcagtta
cgtcgtgacggttttcagcagtgtgttcctttcgatgattaccgttttagtaccacatca
ggtttagatctgattttacaagggattgatcccgtcgctttactctctatcgacaacggc
aaacccttagctcaacaaagtggtttgcaactgatgaacccgccatatccggtcatggtg
agtcaagagttagccaaactgcaagattggcaagaaggggactacatcgcgctgacggat
ggttctcagcttggcccgattgtgattgatagacataaccaagtcacgggaatgcgagta
gtggccgacctatctttggtccgtatgctcaaaaaaggctctggattgacggtgatcgcg
tgtgcggatatgccaccggccaagctcgataaactgaaaaaaagcttgcccaatggctta
acgctcacccgaagtacacgttcagagttggagtctttaacgcaagctttccatctcaac
ttaaccgcgatgggcatgttggcctttttagtcggtatctttattttctatcaagcgatg
tcactgtctatggtgcagcgtcagcctttggtgggcacgctaagacaaattggtgttaat
ggttggcaactggccaaagcattgctgattgaactgttggtattggtattggtgagttgg
gtatgcggtaacgtcttgggtttactgcttgccaatcaattaattccatctgtcgcgagc
agtttgggttatctgtataacgccaatgtggacttagcgattggttgggattggtcatgg
agcagttacagtcttttgatggcactattggcggcctttgcttcttgtacatggcctttg
gtgcgtttgttgcgttctcaacccattcgcttatcggcacgcctgtcattggttcgcttt
gcggggaaagagtttaagctacaagcgctattggcctgtgctttgtgtgtggcggcggtc
gcgatttatcaagccccgaaaagtcagcaatcagggtttgcgattattggcttaatgctg
ctgagcgttgcgctgtttactccctacattatctggacgttattcaccagcttttcttac
acgctgcgctgggtcaaagtgcgttggttttttgccgatgccgccgcgagtatgagttat
cgtggtgtcgccacgatggcatttatggtcgctttagcggccaatattggtgttgaaacc
atggtcggcagtttccgagataccacagatcgctggctgagccagcgccttgcggccgat
atctacctttatccgagtaacagtgtcgcttctcgtatgagccaatggcttggccagcag
cccgaagttgacgcggtttggtggcgttgggaaaaagatttcgcatcgcaacaagggcca
gtacaaatcgtcagtacgggcgcttcggatggtgagctagactcactcacagtcaaactg
ggcgtgcctaattattggtaccatttgcatcatgcgcggggggtaatgatcagtgaatcg
atggcgttgaagctcgggattcgtcccggtgacctgatcgatttaccggaaccgatgggc
tcggggtgggcggtttttggggtctattacgattacggcaatccttatcatcaagtgatg
atgtcccatcaaaactggatgaaagcctttgccggcactggcaacgtggccttggcggtt
gtgctcaaagaagggctcaccggagaaagcgtcaaaaaacgccttgataccattttcagg
ctggatgcggatcgtatctttgataacaccaatattcatagccatgcgatgcgggttttt
gatcgcacgttttcgattgcgggaacgctgggcaatatcaccttatttatcgccgtctgt
ggcattttcttctcaactcttgcgggagaaacatcgcgtttacgccatatctctttgttg
cgttgccttggtgtgtcaggcaaagagctggtactgatcggcggcatgcagttatttgtt
ttcggcgctatctctttattgattgcactgcctttgggattaactttggccaaattagtg
attgatgtggtgatcaaacattcgtttggatggactatgcagttgcaaatggtgccggga
gagtatgtgtacacagtggtgtggtctatgatggctttaattttggcgggcgctttgcca
attattcgtttggcaagaaaatcaccgatgaaatcactgcgagaggctttgtaa
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