Vibrio cholerae O1 MJ-1236: VCD_002783
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Entry
VCD_002783 CDS
T00903
Name
(GenBank) GGDEF family protein
KO
K20954
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_002783
Enzymes [BR:
vcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VCD_002783
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
GGDEF_GdpP
VP4_helical
GGDEF_2
Salyut
Motif
Other DBs
NCBI-ProteinID:
ACQ60947
LinkDB
All DBs
Position
1:complement(1959286..1960575)
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AA seq
429 aa
AA seq
DB search
MMDTDNRWRIALRSIRGELIIIGMIAVSIVLINTPKLLFEDKIHAYEKEQLQLTVELQKT
RIDYASLILEHLETHSLTPQLQEFFNLYHGNLCVLDENSPQQCPLSIIDAVQSTTSASDF
VASTSVNITFAEGSILFFQVQGKQIRVLWFNHASFWPAPQKNISLVLVRGNHIQFLDNPI
AHYNALLNYTILRHRDDYGTLQFENMELSFLRWNLGEYQLISVFNDKVRLFNLIYWVMSA
SLTLLLTLTWFLTRLNLQKVAAQRHVYIDNLTRLNNRHFLNKISTKFIEHPHSIAAMIDI
DHFKKINDQYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYML
DRLRQRVKDDHSLYGTTISIGFTFIDGSLPAAISRADTALYQAKEAGRNQVVADSEKEND
SAADLPIQC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacagataaccgctggagaattgcgcttcgctctatacgaggagaactgatc
attatcgggatgatagcggtcagcatagtattgattaacacgcctaaattattgtttgaa
gataagatccacgcttatgaaaaagagcaattgcaactgactgtcgaactacagaaaacc
cgtattgactacgcaagcctaattctagaacatctagaaacccactcattgactccacag
ttgcaagaattcttcaatctgtaccatggcaatttatgtgtgctggatgagaattcccca
caacaatgcccgttgagcattatcgatgcggttcaatccaccacttcagcaagtgatttt
gtcgcttctacctcagtaaacatcacgtttgcagaaggttctatcctattttttcaagtg
caaggcaaacagatccgagtgctatggttcaaccatgcttcattttggccagcaccacag
aaaaacatcagcttggtcttggttcgcggtaatcacattcagttcttagataatccgatt
gcacactataacgctctactgaattacacgattttgcgccaccgagatgattacgggact
ttgcagtttgaaaacatggagttgagctttcttcgttggaaccttggtgaatatcaattg
atcagtgtgtttaacgacaaagtacgcttgtttaatcttatttactgggtaatgtcggcc
agtttaaccctgttactgactttgacttggttcctcactcgactcaatctacaaaaagta
gcggcgcagcgtcatgtttatatcgacaacttaactcggctcaataaccgacattttctg
aataaaatcagtactaagtttattgaacaccctcactccattgccgcgatgatcgacatc
gatcactttaagaaaattaatgaccaatatgggcacattaccggagatcgcattctacag
gcggtggcctcttgtctgcgcaaaaatgtccgagatggagacaccattatccgctttggt
ggagaagagtttttactattgttccaagcccattcaaacaaagaagcttggtacatgctc
gaccgattgcgtcagcgagttaaagacgatcatagcttgtacggaacaacgatttcgatt
ggttttacttttatcgatggtagtttacccgctgctatttcgcgggcagatactgcactc
tatcaagcaaaagaagcaggacgtaatcaagtggttgccgacagcgagaaagagaatgac
tcagcagcagatttaccgattcagtgctga
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