Vibrio cholerae O1 MJ-1236: VCD_003078
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Entry
VCD_003078 CDS
T00903
Name
(GenBank) TRAP transporter solute receptor unknown substrate 6
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VCD_003078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_003078
Transporters [BR:
vcj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VCD_003078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ACQ61238
LinkDB
All DBs
Position
1:complement(2315059..2316177)
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AA seq
372 aa
AA seq
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MDNQGRQTMSLIHQSVSRVMKRSVLLIAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIF
GDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPN
TLYFTSMPFGMTTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINS
VEDLQGLKMRIPGFAGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFH
KIAPYYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNW
VSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTD
ISLRAYLNSESQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaaggacgtcaaaccatgagtctgattcatcaatctgtatcacgagttatg
aagcgaagcgtgctgcttattgcggcgggtgttgcgctgctcacaacttccgcttttgca
gaagagaaagtttaccgtttaacactggctgagacatggggacctaacttcccaatcttc
ggcgacaccacaaagaatatggcggcaatggcggagaaaatgtccaatggccgtttacaa
attcgcattgattctgccaataaacataaagcgccactgggtgtgtttgatatggtgaaa
tcgggccaatacgacatgggacactccgcgtcttattactggaaaggcaaagttccgaac
actttgtattttacctctatgccttttggtatgacgacgggcgagcaatacgcatggttc
taccacggtggtggtatggaactgatggagaaggtttactctccacacaatatgctctca
ttccccggtggtaacaccgacgtgcagatgggcggctggttccaaaaagagatcaacagc
gttgaagatctgcaagggctgaaaatgcgcattcccggttttgccggagaagtgttagcg
gagctcggtgccaaacccaccaacattgctccgggagagctatacacctcgctcgagcgt
cgcacgattgatgcgctagagtgggtaggaccgtcacttgacctacgtatgggtttccac
aagattgcgccttattactacaccggttggcatgagccagcaactgagctgcaattctta
gtcaaccaaaagacgtgggataaattgcctgaagatctgcgtgaaatcttacgtgttgca
atgcgcacagccgcttacgacatgtatgttcaatcagttcatgaaagtggcaaaaactgg
gtttcgattacccaagagttcccagatgtgaaagtgaagaccttcccagcgcctgtgatt
aaagccctgcgtgaggttaacgaccgactactggcgaaacacgcagcagaagatccactg
gctaaagagatccaagaatcgcaagccaactatctaaaacaaacacgtagttggacagat
atttcgctgcgagcctacctcaatagcgaatcacaatga
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