Vibrio cholerae O1 MJ-1236: VCD_003162
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Entry
VCD_003162 CDS
T00903
Name
(GenBank) transport ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCD_003162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_003162
Transporters [BR:
vcj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VCD_003162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_21
AAA_29
AAA_7
AAA_16
AAA_22
nSTAND1
MMR_HSR1
AAA_23
cobW
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACQ61322
LinkDB
All DBs
Position
1:2408304..2410091
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AA seq
595 aa
AA seq
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MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH
LLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAG
SWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFM
ALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTM
DVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEF
YQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSP
QGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHAQ
WRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQGLDYPISDR
SAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTH
QLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAANQALQAANKGDLDA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaaaaacagcgtagcttgaatctctggctcaagcagcaaagcaaactggct
aagcgctggctcgcaatagctgttgggttgggtgtgttatcaagcctatttctggtggcg
caagccgcactccttgcatcaattctgcatcagctgattattgaacaggtcgataaacat
ctgctcattccacacttctttggcttggctgcactcatcgcagtgcgggcgctgtgctct
tggggacgcgaaatcgctggttttcgttgtggagaagagatacgccgttatattcgacag
ctaatcctagacaagttacgcgacttagggccagcctatatcaaaggcaaaccggccggc
tcatgggcagccttaatgcttgagcaagtcgaaaacatgcacgacttctttgctcgctat
ctccctcagatgtctctttcggttttggtaccgtttgtgatccttgcggtcgtcttccca
gtgaactgggcggcaggactgatttttttgctcacggcgccattggtgccactctttatg
gcgttagtcggcattaaagccgccgatgccagccggaaaaactttaaagctctgcagcgt
ttatccgggcatttttatgatcgcttgcaagccctgaccaccattcgtctattcgatcgc
accacagcagaaaccgagcacatgcgcggcgcttcagaagtgtttcgccatcgcactatg
gatgtactgcggatcgcgttcctctcttctgcagtattagagtttttcacctcgatctcc
attgcactgaccgccgtgtactttggctttagctacattggtgaactcaacttcggttat
tacggcgcgagtgtcactctgtttgctgggttatttgtgttaatccttgctccggagttt
tatcagccgctgcgcgatctcggaacctattaccacgccaaacaactcgcggtgggcgca
gccgaatcgatcgtcgattttctgcaaaccgaagtggataccttacacagtggcgagcgt
catctcagcgataatgacgatattgaaattatcgccaatgatctggtcgttcttagtcca
caaggcaaacgcttagcaggcccgctctcatttacgttgcaaagcggcaaaaccaccgct
ctcgtcggaccaagtggcgcaggcaaaaccagcttaatcaataccatattaggctttatg
ccctaccaaggcagcttaaccattaacggcattgaactgcgcgagttagatcatgcgcag
tggcgacaaaccatcagttgggttgggcaaaatcctctactgctatatggcaccattcgc
gacaacgtgacgctaggcaaacacaatatcgccgatgagcaagtcacacagactctgcaa
gcggcttatgcccaagagtttgttgagcagcagggtttggattacccgatcagcgatcgc
tctgcggggctttccgtaggtcaagcccaacgcctcgccctcgctcgcgctattttgcaa
aatggccgcttttggttactcgatgagcccacggcaagcttagatgcgcgcagtgagcaa
tatgtgatgcgtggactgaccgaaagcattcagcaacgcactgcgttatttgtcactcac
cagttgcaaccgctgcaatcggtcgagcagatcttagtgatggaaaatggcttgctagta
caagcaggacattttgaagacttaagccagcaatctggtttatttgccactatgttagcc
gctaaccaagcgctacaagctgccaacaaaggggatctcgatgcgtga
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