Vibrio cholerae O1 MJ-1236: VCD_003250
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Entry
VCD_003250 CDS
T00903
Name
(GenBank) oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj01501
beta-Lactam resistance
vcj02010
ABC transporters
vcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCD_003250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCD_003250
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VCD_003250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_003250
Transporters [BR:
vcj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VCD_003250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF2786
Motif
Other DBs
NCBI-ProteinID:
ACQ61410
LinkDB
All DBs
Position
1:complement(2503502..2505133)
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AA seq
543 aa
AA seq
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MYKNKITQALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEG
VPESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDF
VYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVP
YFVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDD
KNTVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYY
YGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGK
MTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALEN
QEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAK
TSTSEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI
KAQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaacaaaatcacccaggcactgctgttaggtgctggtttagcggtggctacc
acgtcattcacctcttttgcagcgaatgttcctgctggtaccaaacttgctcctgttcaa
gagctggttcgtggtaacggtactgaagtcgcgtctcttgatccgcacaaaacggaaggt
gttcctgagtccaacgtgattcgtgatctgttagaaggtctggtaaaccaagacgctaac
ggtaacgtggttccgggtgtcgctgaaagctgggaaacgacagacaacaaaacctttact
ttccatattcgtaaagatgcgaaatggtctaacggtgaccctgttactgcacacgatttc
gtctacagcttccaacgtgctgtcgatcctgcaaccgcttctccttactcttggtatatg
gaatacaccaagatgaagaatgcgaaagaaatcattgccggagagaaagacaaatcaaca
ctgggcgcgaaagcagttgatgatcatactctggtttttgagttggagactgccgttcct
tacttcgtgatgatgatgggtcacacaacggtgaaaccgattcacaaagcgacagtagaa
aaatttggtgatcagtggaccaaacctgaaaactttgtcggtaacggtgcttacgttctc
gacaagtgggtggttaacgagcgtttagagctcaagcgtaaccctcaatactgggacgac
aaaaatactgttctgaataaagtgacttatctgccaatcgaaaaccaagtggcagagatg
aaccgtttcctatcgggcgaaattcagatcacgaacgaactgccacttgagcacttcaaa
cgtctgaaaaaagagcatccagaatctgttcaagtgcaaggccaactctgtacttattac
tacggcttcaataacaaaaagccaccatttgacgatgttcgcgtacgtaaagccctttct
tacgcgattgaccgtgatgtggtttctgatgcgattctaggccaaggccaaaaaccggct
tacttcctgactccggaaatcaccgctggatttagcccagaaatgccagcttacggcaaa
atgactcagaaagagcgtattgcagaagcgaagaaattgctggaagaagcgggttacaac
aaatctaaccctctgaaattcactctgctgtacaacacctcagaaaaccacaagaagatt
gcaactgcgatccaatctatgtggaaaacttctctgggcgttgatatcgcactggaaaac
caagagtggaaaacctacctagatactcgtcgtcaaggcaactttgatgtgactcgtgcg
ggatggtgtggtgactacaacgaagcgtcttctttcttgactctgatgttgtcgagcaac
acttcaaacgatccgcagtaccacagtgctgaatacgacgccgtgattgaaaaagcgaaa
acgtcaacttctgaagaagagcgtcaaaaactctatgcggatgcagagaagttgttggct
cgtgatatgccaatcgcgccaatctaccaatacgtaagatcgcgtcttgtttctccaacc
gtcggtggctacccatcgaataacgcggaagacaagatctacgccaaagatctttacatc
aaagctcaataa
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