Vibrio cholerae O1 MJ-1236: VCD_003274
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Entry
VCD_003274 CDS
T00903
Name
(GenBank) GGDEF domain protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_003274
Enzymes [BR:
vcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VCD_003274
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
DUF2116
Motif
Other DBs
NCBI-ProteinID:
ACQ61434
LinkDB
All DBs
Position
1:complement(2528486..2530507)
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AA seq
673 aa
AA seq
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MLLNAFSRRVFLWLGWLLISTSSLAATSTTYKVATEADDVVTRVLFDSIAHHFNLEIEYV
NYPSFNDILVAIETGNADFAANITYTDLRAQRFDFSRPTNIEYTYLYSYGGLRLPELRLV
GIPKGTTYGTLLKEHYPYIQQVEYEGHLEALTLLESGRVDGVVDAINQLKPMLLKGLDVQ
LLNDQLPIQPVSIVTPKGKHSALLGKIEKYAHSAHVQRLLRESIQKYQLDIRKQALRQSV
VESGLNVQRVLRVKLENNPQYALYQPDGSVRGISADVVFQACEMLLLKCELVSNGQETWE
SMFDDLQDKSIDILAPITVSQQRKNLAYFSESYYHPQAILVKREHYKDDVYSNVSELVAE
RIGVIKDDFFEELLQQMLPNKILFSYASQEEKVQALLNKEVDYIVLNRANFNLLLRESTE
MLPIVEDTMIGSFYQYDIAIGFAKNPLGATLAPLFSRAIKMLNTEQIIHTYDYQPNWRAT
LLAEKKYQRSTQWLFAMAFIVLFMVAFYLHGISHTDNLTKLRNRRALYNRYRRGLSPRLS
LVYLDVNTFKSINDQYGHEVGDKVLKQLAQRIEAVWRGRSYRIGGDEFILIGECSAKRLE
HVVAQCERFMFVDAERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAKAESTQSP
FQAASKVKGLHIV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgctacttaacgctttttcacgccgagtcttcctttggctaggttggctattgatttcc
accagcagtttagccgctacatctacgacgtataaggtcgccaccgaagcggatgacgtg
gtgactcgtgtgctttttgattcgattgctcaccacttcaaccttgaaattgaatacgtc
aactaccccagttttaacgatattctggtggcgatagagactggcaacgccgattttgct
gccaacattacttacactgatttgcgtgctcaacgttttgatttttcaagaccaaccaac
atcgagtacacctatctctacagttatggtggcctacgtttacccgagttgcgcctcgtg
ggtatcccgaaaggaaccacctacgggaccctactaaaagaacactatccctatatccag
caagttgagtatgaagggcatttagaagcgctcactttgctggaaagtggccgagtagac
ggagtggttgatgcgatcaatcagctcaaacctatgctactgaaagggcttgatgtacaa
ctccttaacgaccaattaccgattcagcctgtttctattgtgacgcctaaaggcaaacac
tcagcgctattgggcaagattgaaaaatacgcgcattcggctcacgtacaacgtttattg
cgtgaatcgatccaaaagtatcaattggacatccgtaagcaagctctgcgtcaatccgtg
gttgagagcggactcaacgtgcagcgtgtattgcgtgttaagctagagaacaacccgcaa
tatgcactttatcagccagacggttcggttcgtgggatcagtgctgatgttgtgtttcag
gcctgtgagatgctactgctgaaatgcgaattggtcagtaatggtcaagaaacatgggag
agcatgtttgatgatttacaggataaaagcatcgatattttggctcctataacggtttct
cagcagcgtaaaaacctcgcttacttcagtgaaagctactaccacccacaagcgattttg
gtcaaacgtgaacactataaagacgatgtgtatagcaatgtgtctgagttggtggctgaa
cgtattggcgtcatcaaagacgatttttttgaagagctgttacagcagatgctgccgaac
aagatcttgttcagctacgcaagtcaggaagagaaagttcaagccttactgaataaagag
gtggactacatagtgctcaatagagccaattttaatctcttgcttcgcgagtcaacggag
atgttaccgattgtagaagacaccatgattggcagtttctaccaatatgacattgcgata
ggttttgctaaaaatccacttggtgcaactctggcacctcttttctctcgggcaattaaa
atgctcaataccgaacagatcatacatacctatgattatcagccaaattggcgagccaca
ttacttgcggaaaagaaatatcagcgcagtactcaatggctttttgccatggctttcatc
gttttgtttatggtggcgttttacctccatggcatatcacataccgataaccttactaag
ttgcgcaatcgtcgcgctttgtataaccgataccgccgcgggttatcgcctcgcctaagc
ttggtttatcttgacgtgaatacgtttaaatcaatcaacgatcagtatggacatgaagtg
ggtgacaaagtccttaagcagttggctcagcgcatcgaagcggtatggcgtgggcgcagc
tatcggattggtggggatgaatttattttaatcggtgaatgttctgctaagcggcttgaa
catgtggttgcgcaatgtgaacgttttatgtttgtggatgcagagcgcgatgtcagtttt
gaagtgagtgtggcgattggtattgctaagaatcgtgagcggaccgaatcactcaatgag
gtgatgcaccaagcggatattgcgatgtatcgcgctaaggcggaatcgacgcaatcgcca
tttcaggctgccagcaaggtaaaaggattacacatcgtttaa
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