Vibrio cholerae O1 MJ-1236: VCD_003288
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Entry
VCD_003288 CDS
T00903
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03030
DNA replication
vcj03430
Mismatch repair
vcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCD_003288
03430 Mismatch repair
VCD_003288
03440 Homologous recombination
VCD_003288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcj03032
]
VCD_003288
03400 DNA repair and recombination proteins [BR:
vcj03400
]
VCD_003288
Enzymes [BR:
vcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VCD_003288
DNA replication proteins [BR:
vcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VCD_003288
DNA repair and recombination proteins [BR:
vcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VCD_003288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_30
ResIII
AAA_18
AAA_2
AAA_assoc_2
AAA_19
PIF1
Mg_chelatase
SKI
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACQ61448
LinkDB
All DBs
Position
1:complement(2539034..2541112)
Genome browser
AA seq
692 aa
AA seq
DB search
MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK
GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM
LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA
TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP
SHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPMM
AAQPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRHQLRSKRQEVQNK
GADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAVK
SEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFVRQG
DQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEGETPLELRERLYQQKL
TSALHSLQTDPNVQFIERRFNAQLDSDSVRPI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttgctttagcacgcaaatggcgtccgacacgatttagcgaagtggtcgga
caatcccatgttttaaccgctttagagaacgctttggcgcaaaaccgtttgcaccatgcg
tacttgtttagtggcactcgaggcgtgggtaagaccaccataggtcgtttgtttgcgaag
gggctcaactgcgagacgggcataacggctacgccttgcggccagtgtgcaacctgtcaa
gaaattgatcagggacgctttgtggatctgctcgagattgacgctgcatcacgcaccaaa
gtggaagatacgcgcgagctactcgacaacgtgcagtacaaacctgcgcgtggacgcttc
aaagtttacctgatcgatgaagttcatatgctctcgcgtcacagcttcaatgcgctactg
aaaacgcttgaagagccgcctgagtatgtgaagtttttgctggcaaccactgatccacaa
aagctgcctgtgaccatcttgtctcgctgtttgcagttccatctcaaaccgatcagtgta
gaaaatatccagcagcagctcgataaagtgctgcacgccgaacagatttcgagcgacagc
aaagcactcaatctgctcgcccacgctgcggatggcagtatgcgcgatgctcttagcttg
accgatcaagcgattgctttgggcaatggcgtagtgaaaagtgacatcgtcgcgcacatg
ctcggcacattagatacggatcattctctacatctcttgcaagccatcagcctgcaaacg
ccacaagcagtcatggattgcatcgaaacacttgcccaaaatggcgtagagtgggatgga
ttactgcaacagctttcgactcaactgcatcgaattgctatgtaccaagcgttgcctgcc
accttggataaatcgctgccagaggcatcgcgtattgagtcgttggccaaaaccttagcg
ccgcaagatgtgcagctttactaccaaattgcgctcaaaggtcgacaagatttaccactg
tcacccacggcgcgaattggcattgaaatgttgatgctgcgtatgatggcgtttcgtcct
tctcacgtctccttggcgagtgtgattgtgccacccaatacggcagtgacagctccaaca
atcgcggcaccgacttctcaaatggcggctgcagcgccgcaaccacaacccgttgctcag
tcaaacgtatcgcaatctgcctcgcaagcgatgcctcaccctgtcgcaccgccaatgatg
gcagcacagccagtggtagaaagcgcggtgccagtcactcagcgagaagcatcacactca
ataaacgctccagaagcctctgttgtcaccaataccgacacgcagagtcaagccagcatg
ccagccctagcagggctgcgtcatcaactgcgctctaagcgacaagaagtacaaaacaaa
ggcgcggatggaaaaaagtctgacgcgacatctgctactccagcatcggcgctagagcgt
attgcgcagagagcacagcaagtgcaggtgtcgccagaacgcaatgatgaagatgagttg
gagcctgaagaggaaatctatcaatggcgtccgatgcaacctatcgaagtcgcggtaaaa
agtgaagtcacgccaacgcaactgaaaaaagcgttagagcatgaaaaaacgccggaaatg
ggagcgaagttgattgaagaagcggtcgcgcaagacgcgtggtcggcattggttcaacgg
ctagagactgccaaaatggttgagcaattggcgctgaattccgcttttgttcgtcaaggc
gatcagatttctctgacgctgcgtccaagtcatgcccatctgcacaacgaaaaagcgcag
caagagttagaacaggcattgaatcatgtgcttggtgaagcttgttcattgaacattacc
gtgggacaagagggagaaaccccccttgagctgcgtgaacggctctaccagcagaaactc
acttctgcgctgcacagtttacaaactgatcccaacgtgcagtttattgagcgtcgattt
aatgcacagctcgatagcgacagcgtacgacccatttaa
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