Vibrio cholerae O1 MJ-1236: VCD_003293
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Entry
VCD_003293 CDS
T00903
Name
(GenBank) transcriptional regulator LysR family
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_003293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcj03000
]
VCD_003293
Transcription factors [BR:
vcj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VCD_003293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ACQ61453
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All DBs
Position
1:2543846..2544721
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEA
GERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDI
HIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHA
EELHQHQLLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVM
LREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHLQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatgacctaaacctctttcgactggttgtcgaaaatggaagctatacctca
acttcaaaaaaaaccatgatccctgtggcaacgatcacaagacggatccaagccttggag
gactccctaaaccttaggttactcaatcgtcacgctcgtaaactgactctgaccgaagcg
ggcgaacgtttctacaaagattgctctcccctgctggagcgtctcgcttcaatgacagaa
gagatcaccgatgaatgtcgtggtgcgtcggggcgcattcgtatttctgcaccatccaat
ctgacaaaacgaatgatgatgccgatgttcaatgcctttatggaaaaatatcccgatatt
catattgagctgatgatgagtaaccaagccgacgatctcgaccccactgaatgggatgtg
attttccgagttggcccacagcgtgattccagcttgatagctcgtaaaatcggtgaagtg
aaagacattttggttgccagccctcaatacttgtcgagtcatccgcaaccgactcatgct
gaagagttgcatcaacatcagttgctcaaaggttatccattgctcaaatggcaactgacc
aacagccaaggtgaaactgtcgtcaacagtgatcgcggccgttttcaagccagcgcactg
aatgttgttcgcagcgcatgttcagaaggtttaggcattacgctcatgcccgatgtgatg
ctgcgtgaatttcttgaggatggcagtttggtacaagtactgtcggattggagctcaaac
ccgcgggatatctacatgctgtataaccacaaagatcaccagccggaaaaagtgcgcctg
tttattgattttgtgattggctaccacctgcaataa
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