Vibrio cholerae O1 MJ-1236: VCD_003339
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Entry
VCD_003339 CDS
T00903
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcj03016
]
VCD_003339
Enzymes [BR:
vcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VCD_003339
Transfer RNA biogenesis [BR:
vcj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VCD_003339
Prokaryotic type
VCD_003339
BRITE hierarchy
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GFIT
Motif
Pfam:
PseudoU_synth_1
RTC_insert
Motif
Other DBs
NCBI-ProteinID:
ACQ61499
LinkDB
All DBs
Position
1:complement(2593044..2593838)
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AA seq
264 aa
AA seq
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MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV
VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP
GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY
VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS
VDYPAHFGLPEMPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgttaggtattgagtatgacgggactcactactacggttggcagcgccag
agagaagtcaaaagtgtccaagaagcgttagaaaaggcgctgagtaagattgccaatcat
ccagtggaagtgcagtgtgctgggcgaactgatgcgggggtacatggtactgggcaagtg
gtgcactttgataccaccgccgaacggcagatggtcgcttggaccatgggcgccaacgcg
aatttgccgaaggatattgcagtacgctgggcgatggcggttcctgatgaatttcatgca
cgattcagtgccactgcacgccgttatcgttatgtcatttacaaccatgtttatcgcccg
gggattttgaattctggtgtcagccattaccacggcgagctggatgttgaaaaaatgcag
caagcagggcagtacttgctgggggaaaatgatttcacctcatttcgtgcggtgcattgt
cagtcccgtagtccttggcgtaacgtcatgcatctgaatgtgacgcgtcacggtcgttat
gtggtgattgatattaaagccaatgcgttcgtgcatcatatggtacgcaatatcacgggt
agcttgatagccgtcgggcgtggtgagcagaagccagagtggattcaatggttattggca
caaaaagatcgcaccttagcggcggcgacggccaaagcggaggggctctacttggtttct
gttgattaccctgcgcattttgggttgcccgaaatgccaattgggccacttttcttgcct
gataatttgaactaa
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