Vibrio cholerae O1 MJ-1236: VCD_003386
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Entry
VCD_003386 CDS
T00903
Name
(GenBank) penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00550
Peptidoglycan biosynthesis
vcj01100
Metabolic pathways
vcj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VCD_003386
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VCD_003386
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
VCD_003386
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VCD_003386
Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VCD_003386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
ACQ61546
LinkDB
All DBs
Position
1:2647673..2649589
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AA seq
638 aa
AA seq
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MLRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRI
KVVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAF
EKERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYV
SRINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTL
KYVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVH
GISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWR
IPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTG
IDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKV
IAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAF
QNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENG
GGGSSNGAPVVRQIFDHVILGKKEEEPKAESKEEVIQP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttacgccagcatacccctatccgcgaccatcaagccgaaacgcatctgtttcgtaat
cgtgccatcgtctcttttgtcgggatcttgatctgcatgggtctgctggtgaccaacttg
tacaatattcagatcaaccaatatcaagactacaaaacgcgatccaacgataaccgcatc
aaagtcgttccgattgcgcctaaccgcgggctgatttttgaccgcaacggtgtgcttctg
gcggaaaaccgtccggtattcaacttagaagtgatccctgaaaaagtgccaaatatggaa
gagaccattgcgcgcttgcaacagctcattgagatcagcccagaaaagcttgccgccttt
gaaaaggaacgcaaacagactcgccgctttaattctgtaccgctgctgactcagcttacc
gacgatgaagtggcgaaattttccgttaatcaacataaattccccggcgtttcggtcacc
gctaacctcaaacgctattacccctatggcgaagtgctgacccacgtgattgggtatgta
tcgcggattaacgataaagatctcgaacgcttggacaaagaaggtaaaaaagccaactac
caagctacccgagatatcggcaaactggggattgaacgctactacgaagacttactgcac
ggtaccgctggttatcaggaagtcgaagtcaacagccgtggccgtgtcattcgtacccta
aaatacgtcccacccattccgggaaaagatatcgtgctcaatctcgatatcgaacttcag
ctctatgcctacaagctgctcgaaggtcgccgcggctcgattgtcgctctcgatcctaaa
gataatggcgtgctcgccatggcatcgagcccaagttacgaccctaatgcattcgtgcat
ggtatttcaggtaaagcctacagcgatttactcaatgacaaacgtcgtccattagtaaac
cgcaccacgcttggcatttatccgccggggtcaactgtcaaaccgtttattgcggtgtcc
gcactgcaagatgggatcattacacctaatactacccgtaatgatccgggttactggcgc
attcccaataccgatactcggcctttccgcgactggctacgttggggccacggccgggta
gacatcattaaatctctcgaagaatcggtagataccttcttctatcaaatcgcctatgac
atgggcatagataaactctccagttggatgatgcgctttggctttggggatctgacgggg
attgatatttacgaagagagtaaagccaatatgccaacacgcgagtggaaaatggcacgt
cacaaagtgccttggtatcaaggtgacaccattccggttgggattggacaaggctattgg
actgccacaccgatgcaaattgctaaagcgacgtcggttttagttaaccacggtaaagtg
attgccccgcatctgctgcgtgccaccatagataacggtgaacagttctcaacccaaaaa
gagaccgagtacaccacttacccaccgattgatggcgtgccgaaaaagtattgggacatg
gctatccatggcatgtatctggttaaccatggtgctaaaggaaccgcacgtcgcgccttc
cagaatatgccttacgaaagtgcgggaaaatcagggacagcgcaagtatttggtctggcg
gaaggccaaaaatataacgcaagtgagttagcagagcacttacatgaccatgctctgttt
acaggctttgcccctgtcaaagatcccaaagttatcgtcacctttgtattggaaaatggc
ggcggcggctccagtaatggtgcgccagtcgtgcgacaaattttcgatcacgtgattttg
ggcaaaaaagaagaagagccaaaagcagaatcaaaagaagaggtaatacagccatga
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