Vibrio cholerae O1 MJ-1236: VCD_003394
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Entry
VCD_003394 CDS
T00903
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00260
Glycine, serine and threonine metabolism
vcj00460
Cyanoamino acid metabolism
vcj00630
Glyoxylate and dicarboxylate metabolism
vcj00670
One carbon pool by folate
vcj00680
Methane metabolism
vcj01100
Metabolic pathways
vcj01110
Biosynthesis of secondary metabolites
vcj01120
Microbial metabolism in diverse environments
vcj01200
Carbon metabolism
vcj01230
Biosynthesis of amino acids
vcj01240
Biosynthesis of cofactors
vcj04981
Folate transport and metabolism
Module
vcj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VCD_003394
09102 Energy metabolism
00680 Methane metabolism
VCD_003394
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCD_003394
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VCD_003394
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VCD_003394
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VCD_003394
Enzymes [BR:
vcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VCD_003394
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACQ61554
LinkDB
All DBs
Position
1:complement(2655673..2656923)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEQDAKDLANWMCDVLDNINDQGVIEATKQKVLAICQRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgctgattacgatccggagctatacgctgccattcag
gaagagacgcttcgtcaagaagaacatattgaacttattgcttcagaaaactacaccagc
ccgcgtgtaatgcaagcacaaggttctcaactgaccaacaagtacgccgaaggttatcca
ggtaagcgttactatggtggttgtgagtacgtggacaaagcagaagctttagcgattgat
cgtgcttgccaactgtttggctgtgaatacgcgaacgttcagccgcactctggatctcaa
gcgaacagcgctgtgtacatggcgctgctcaacccaggtgacaccgtgctaggtatgagc
cttgctcacggtggtcatttgactcacggttcaccggttaacttctcgggtaagcactac
aatgtgatcccttacggtatcgatgaagcgggtcaaattaactacgatgaaatggaagcc
ttagcactggagcataagccaaagatgatcatcggtggcttctcggcttactcacaaatc
gtggattggaaacgcatgcgtgaaatcgccgataaagtgggtgcttacctgtttgttgac
atggcgcacgttgcgggtctgattgcggcgggtgtttacccaagcccagtgccttttgca
cacgttgtcacgaccaccacgcataaaacactggcaggtccacgcggtggcttgatcttg
tcaaatgccggtgaggagatgtacaagaagctgaactctgcagtattccctggcggccaa
ggcggtcctttgatgcacgtgattgcggctaaagcggtggcgttcaaagaagcaatggag
cctgagtttaaagagtatcaagcgcgtgtggtgaaaaacgccaaagccatggtggcgcag
ttccaagaacgtggttacaagatcgtctctaacagcacggaaaaccatttgttccttgtt
gatctgattgataaaaacatcacaggtaaagaagctgatgccgctctgggcgctgccaat
atcacggttaacaagaactcggtaccaaatgacccacgcagcccgtttgtgacttcaggt
atccgtgtcggtacaccagcaatcactcgccgtggttttaccgagcaagacgcaaaagat
ctcgccaactggatgtgtgatgttctagacaacatcaatgatcaaggtgtgattgaagcg
acgaaacaaaaagtattggcgatctgtcaacgtctgcctgtttacgcttaa
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