Vibrio cholerae O1 MJ-1236: VCD_003413
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Entry
VCD_003413 CDS
T00903
Name
(GenBank) hypothetical protein
KO
K20946
polysaccharide biosynthesis protein VpsE
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCD_003413
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Motif
Pfam:
Polysacc_synt_3
Polysacc_synt
Motif
Other DBs
NCBI-ProteinID:
ACQ61573
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Position
1:complement(2678866..2680275)
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AA seq
469 aa
AA seq
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MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSM
LRLYPGYSDREQVQLVQSISLLVIIGSLLGFIVIAATLFIYQQLNWERLLVLSALLSVKS
IFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALC
LGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANL
LMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPALLGLGILQDEII
RLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWVSLSGLIASIFL
LPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLY
LVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgattgctagtctactcaaatatgctcctgttcaggtcttttccgctctgagtgtcttt
gctctgatcgctgtacaaactcgctttctctctccggaacattatggtgtgttggcggta
gcgatggtggtgctcgaactcgtgcgtgcttttagtgctcagtggctcaacacgtcgatg
ttacgtctttaccctgggtattcagatagggagcaagtccaactcgttcaaagcatttca
ctgctggtcatcatcggatctttgcttggctttattgttattgccgcgactttatttatt
tatcagcaattgaattgggaacgattattggtactgagtgctttattgtcggttaaatcg
atatttcaataccagttagaattaagtcgcttaaatgagcgattgagcgtttatcgtcaa
gcgaccgtattgcagtcaatttcagcggtagtgctctccatcctttcgctctcttgggcg
gcgactattgagtctgcgttatttgctttaaccttgagctttggcattggggctttgtgt
ctgggtttacctcagcggcctaaatggcatattgcaatgttaaagcgtttgcttgcttat
ggtattccgatcatgttggctgggggaattggtgtactgggtggacgaatcgatcgttta
tttatcgctcattttgttgggatgaatgaaaccggtgtttatgctgcgcaagctaactta
ttgatgggggttttggggctcgtttttatggtgatttctatgcctctctaccctaactta
gccaaacatgcggaagataaaatcgctcttgtgagtcagcataaaacctatctgcattta
ctggttacccttacttttccagctttacttggtcttggcatattacaagatgagatcatt
aggctctttttgggtgagcaatatctgagtcgttctagcgaactattctgggtgttagcg
atcgctgtttatctgattaattttaaaggtcattaccttgatcatggtttacagtttcta
ttacagactcgcaagctgctatgggtttctctctcgggcttaatcgcgagcattttccta
ctacctttgatgctcaatcaatttggcatgttcggcgcggctatcaccttgcttatagtg
agtggcttagtcgcaatactctcttttattagctcatggcgatcggggtatcgttatgct
atcggcatggatggcatcaaagtgatcatttcggcactgctgatgggtggctacttatac
ctagtgaaacagtggccattggcgatccattcgttattcgctctagccttttatgtcact
acctcattgttgttttatggtatctgtttgtggtgcttgaatgcttttaatgcacgtcag
cgtttattctcaatctggaggcctaattga
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