Vibrio cholerae O1 MJ-1236: VCD_003462
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Entry
VCD_003462 CDS
T00903
Name
(GenBank) transglycosylase Slt family
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
VCD_003462
Enzymes [BR:
vcj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VCD_003462
Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VCD_003462
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ACQ61622
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All DBs
Position
1:2732262..2733857
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AA seq
531 aa
AA seq
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MMTPFAYKLPIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGP
DGPTGLDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFR
AGPAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQ
QKYPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPI
SWFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLP
RWTPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDP
EQSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWA
DVKDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIED
LTVIALDEEFFNEEANREILDEEAEALESESLENSESSAEPSAKPSTESKN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgatgactccttttgcctataaactccccattcgcgcactctggctaggcttattaagc
ctgctcttagtcggttgccaaatcgattccgagcccaaaagcgagctagaaaaaattcgt
gaacgtggtgttttacgcgttggtacgctcaacaatcccctctcctactacatcggccct
gatggcccaacgggattggattacgagttagcccgcgaatttgccaaagagcttggcgta
aagctggaaatgaagccagcataccgcctatctagcctgtttcctgccttaaaaaacggt
gaagtggacatcattgccgcaggcttaagccaatccgaagagcgactcaaagattttcgc
gcaggtcctgcttattattacgtttcgcagcaagtggtctataaaaaaggtgactggcga
ccacgcagcttcaaacagttggtcgaacgccagcaaaccttattaaaggacaatcctgag
ctcgcctttttcagcgtggtggatgactcccattttgagcacaccttgctagccaaacag
cagaaataccccgattttcaatttcatgtcgacagcaattccgatgtgaatgacttactg
aaaaaagtctcacaaggagagttactgtttacgatggccgactctgttgaggtgtcgctt
tctcaacgcatctatcctgaactggcggcggcatttgaattaaccgaagatcagccgatc
tcatggtttatccgccgttccgacgatgaaagtctgtatgccttaatgattgaattcttt
ggcaatctcaagcaatcgggctatttggcgtctttggaagaaaaatacatcggccatatt
ggtgcctttgattatgtcgatacccgcgcctttattcgcgcgctggatacacgattacct
cgatggacgcctctctttcaaaagtactcggcagagtttgattggcgtttagtcgccgca
cttgcgtatcaggagtcgcactggaatccgtatgccaaatcgcccacgggtgtccgtggt
ttgatgatgttgacactaccaaccgcgcgcagtgtaggggtaagcgatcgcctcgatcca
gaacagtcgattcgtggtggggtggaatacttgcgacgtatgatggagcgtgtccctgac
tcgatttccgaacatgaaaaaatttggtttgccttagcctcttacaacattggctacggg
catatgatggatgcgcgacgcttaaccaaaagccaaggcgcagatcctgactcatgggcg
gatgtcaaagatcgcctaccacagctacagcagaaaaaatatttcacccagacccgctat
ggctatgcgcgtggcgacgaagcacgtaattatgtggaaaatattcgccgttactatcaa
agcatcatcggccatcttgagcagcgtcaattggcgacaggcgatgaaagtattgaagat
ctcaccgtgattgcgcttgatgaagaatttttcaatgaagaagcaaaccgtgaaatcttg
gatgaagaagcggaagcactcgaatcagagtcactcgaaaacagtgaatcgagcgccgag
ccatctgccaaaccatccactgagagcaaaaattag
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