Vibrio cholerae O1 MJ-1236: VCD_003618
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Entry
VCD_003618 CDS
T00903
Name
(GenBank) hypothetical protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCD_003618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_003618
Transporters [BR:
vcj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VCD_003618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ACQ61774
LinkDB
All DBs
Position
1:2909166..2910206
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AA seq
346 aa
AA seq
DB search
MIKRFLSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERS
LLMLKSVQLPFDIMVLDNVSAFIFSRQNVFEDLTALPNRANNDPMWLQACGTHAVPYFWG
SVGIAYRKSLFDKPPTQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDT
LRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSV
PEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVE
HREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISSVTYQYEAKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgctttctgtcgctgatggtattgaatactgtctgttatcaagccagcgct
ttggaactgaatgtctacctttgggaagatacgattgcaccaagcgtagttgaggcatgg
cataaaaaaaccggcgtctccgttaatctcttccatttcgataatgatgatgaacgcagt
ttattaatgctcaaaagcgtacaactgccctttgacatcatggttttggataacgtctcc
gcgttcattttctcaaggcaaaatgtttttgaagatctgaccgcccttcccaatcgtgcg
aataatgaccctatgtggctacaagcttgtggcacccatgcggtaccttatttctggggc
tcagtcggcattgcctatcgcaaaagcttgtttgataaacctccaacgcagtggagtgag
gtcgtcgatatcgctccggcgcatcgtggacgagtgggtatgcttaaagacagtgtcgaa
acactactgcctgcactatacatgctcaacgcctctcccattaccgattctatcgacaca
ctaaggcaagcgtatcgtctcttagacgccgccaatccccatatcctgacttatgagtat
gtattgagctatgtacgcagccacccacaaaccgacaatctacatatggcggtctcttac
agtggcgatcactattcactgaaccgcttcttcaatactcaagactgggactttagcgtt
ccagaaggccgcccttatttgtgggttgattgtatggccgtaaatagcgtttctcccaac
acagtgcaagccaaagcttttttggatttcttgatgaaacctgacattgccgcaatcaat
gccgaatatattcgagctgcaagcccgaactacaaagcacgcgctttgctccctgtagag
caccgagaagatctctcgatttatctcccagagcagcgattggcggaggggataatcgac
agcgaactctcggcgaaaaacctcagtctgcgtgccaaaatcatcagcagtgtgacttac
caatatgaagctaaaccatag
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