Vibrio cholerae O1 MJ-1236: VCD_003642
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Entry
VCD_003642 CDS
T00903
Name
(GenBank) transcriptional activator HlyU
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcj03000
]
VCD_003642
Transcription factors [BR:
vcj03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
VCD_003642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_24
HTH_11
HTH_34
DUF7346
HxlR
Rrf2
HTH_IclR
TrmB
Fe_dep_repress
MarR
HTH_28
DUF7344
HTH_27
TFIIE_alpha
DUF2582
HTH_Crp_2
HTH_1
MC2
HTH_Cmi2_C
DUF7347
DUF6432
DUF7342
Pro-kuma_activ
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ACQ61798
LinkDB
All DBs
Position
1:complement(2938342..2938668)
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AA seq
108 aa
AA seq
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MPYLKGAPMNLQEMEKNSAKAVVLLKAMANERRLQILCMLLDNELSVGELSSRLELSQSA
LSQHLAWLRRDGLVNTRKEAQTVFYTLSSTEVKAMIELLHRLYCQANQ
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatttaaagggggcaccaatgaatctccaagagatggaaaaaaattctgccaaa
gcggtagttttgctcaaagcgatggccaatgagcggcgactgcaaattttatgtatgtta
ctggacaatgaactgtcggtaggggaattgagtagccgtttggaactcagccaatctgct
ctttctcaacatctagcgtggctacgtcgtgatggtttagtgaatacacgtaaagaagcg
caaactgtgttttatacgttgagcagtacagaagtgaaggcgatgattgaactgttgcac
cgtctttattgtcaggcgaatcagtag
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